We get the following error on one subject when running mris_anatomical_stats. The same command workson other subjects who were generated the same way. Using freesurfer-Darwin-tiger-i686-stable-pub-v3.0.5, also tried freesurfer-Linux-rh9-stable-pub-v3.0.5. No heavy processes were running on the machine that would prevent memory allocation.
thanks, Rutvik --------------------- % mris_anatomical_stats -a ep.1071/label/lh.aparc.annot -b -i 0.5 8 -f ep.1071.lh.stats ep.1071 lh computing statistics for each annotation in ep.1071/label/lh.aparc.annot. only considering thicknesses in the range [0.5,8.0]. reading volume /usr/home/possing/pub/Epilepsy/ep.1071/mri/wm.mgz... Talairach transform /home/mgolovin/fs_subjects/ep.1071/mri/transforms/talairach.xfm does not exist ... Loading tal xfm file /usr/home/possing/pub/Epilepsy/ep.1071/mri/transforms/talairach.xfm reading input surface /usr/home/possing/pub/Epilepsy/ep.1071/surf/lh.white... reading input surface /usr/home/possing/pub/Epilepsy/ep.1071/surf/lh.pial... reading input surface /usr/home/possing/pub/Epilepsy/ep.1071/surf/lh.white... done. computing second fundamental form...reading colortable from annotation file... CTABreadFrom: could not allocate -2 bin table Cannot allocate memory Segmentation fault (core dumped)
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