Dear all, I'm trying to manually edit the -segmentation step in the recon -all -autorecon2 command. Actually, my problem is that I need a cortex parcelisation of a newborn brain and, as far as I know, I cannot run directly the -recon all as it s based on a adult brain template.
My idea was, inf act, to reedit the -segmentation step, as I have a manually segmented template of a newborn brain, and then, run this modified recon -all to obtain the parcelisation. Is it possible? Does exist any way to obtain this cortex parcellisation for a newborn brain using FreeSurfer? Thanks _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
