The 001.mgz should already be in native space.
sameer kumar wrote:
Yes, I used the dicom to run recon-all.
I converted the results back to native space, using
mri_convert -rl orig/001.mgz XX.mgz XX_native.mgz
the images in the native space are not in the same orientation as
001.mgz, which i got from the dicoms.
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