Hi,
> What's in T1-neuromag/slices?
Just an error.log file.
> What version are you using?
I am not aware of the version of the FreeSurfer. How can I check the version ?
Shriks
SHRIKANTH KULASHEKHAR wrote:
> Hi all,
>
> When I attempt to create a high-resolution head surface tessellation using
> mkheadsurf, I end up with the following errors:
>
> For " mkheadsurf -subjid xxx" the error: cannot find volume T1 for xxx
>
> or for
>
> [r...@localhost bem]# mkheadsurf -subjid xxx -srcvol T1-neuromag/slices
> INFO: log file is /usr/local/freesurfer/subjects/xxx/scripts/mkheadsurf.log
> --------------------------------
> Wed May 6 01:03:46 EEST 2009
> /usr/local/freesurfer/subjects/xxx/bem
> mri_seghead --invol /usr/local/freesurfer/subjects/xxx/mri/T1-neuromag/slices
> --outvol /usr/local/freesurfer/subjects/xxx/mri/seghead --fill 255 --thresh1
> 20 --thresh2 20 --nhitsmin 2
> --------------------------------
> input volume: /usr/local/freesurfer/subjects/xxx/mri/T1-neuromag/slices
> output volume: /usr/local/freesurfer/subjects/xxx/mri/seghead
> threshold1: 20
> threshold2: 20
> nhitsmin: 2
> fill value: 255
> Loading input volume
> corRead(): can't open file
> /usr/local/freesurfer/subjects/xxx/mri/T1-neuromag/slices/COR-.info
> ERROR: could not read
> /usr/local/freesurfer/subjects/xxx/mri/T1-neuromag/slices
> ERROR: mri_seghead
>
> Any advice on what could be wrong ?
>
> Thanks in advance
>
> shriks
>
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