Is this for a permutation test? Sorry, this is my fault. I've put a new version here ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_glmfit-sim that should fix the problem. Can you test it out?
thanks doug On Mon, 1 Jun 2009, Georg Homola wrote:
Hi All (and especially Doug, again)! As one of the final steps I run mri_glmfit-sim for clusterwise correction (of my random effects analysis btw.). It always worked well and I also didn't change the command line recently, but since I updated Freesurfer to the latest version (4.3.1) it quits with: ERROR: you must supply --fwhm with --sim, even if it is 0 There is no flag like --fwhm for mri_glmfit-sim and when I try --fwhm-override it won't change anything. Am I missing something? Thanks Georg _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
-- Douglas N. Greve, Ph.D. MGH-NMR Center gr...@nmr.mgh.harvard.edu Phone Number: 617-724-2358 Fax: 617-726-7422 In order to help us help you, please follow the steps in: surfer.nmr.mgh.harvard.edu/fswiki/BugReporting _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
