All,
I'm encountering an error when I run selxavg3-sess and I am not sure how
to get around the problem, or what it means.
I am running the following command, which has worked with the data for
the other participants in my study.
selxavg3-sess -s c43 -d . -analysis Flanker_nResp -overwrite
Several minutes in I am getting the following error...
GLS Beta Pass
run 1 t= 0.0
Loaded
/ncf/anl/anl08/CONCON/fMRI/functional/c43/Flanker/006/flanker_nResp.par
as a par3 file.
run 2 t= 5.7
Loaded
/ncf/anl/anl08/CONCON/fMRI/functional/c43/Flanker/007/flanker_nResp.par
as a par3 file.
run 3 t=11.3
Loaded
/ncf/anl/anl08/CONCON/fMRI/functional/c43/Flanker/008/flanker_nResp.par
as a par3 file.
run 4 t=17.1
Loaded
/ncf/anl/anl08/CONCON/fMRI/functional/c43/Flanker/009/flanker_nResp.par
as a par3 file.
run 5 t=22.7
Loaded
/ncf/anl/anl08/CONCON/fMRI/functional/c43/Flanker/010/flanker_nResp.par
as a par3 file.
GLS Residual Pass
/users/aholmes/.bashrc: line 229: SetUpFreeSurfer.sh: No such file or
directory
run 1 t= 0.0
Loaded
/ncf/anl/anl08/CONCON/fMRI/functional/c43/Flanker/006/flanker_nResp.par
as a par3 file.
??? Error using ==> fclose
Invalid file identifier. Use fopen to generate a valid file identifier.
Error in ==> save_nifti at 162
fclose(fp);
Error in ==> MRIwrite at 145
err = save_nifti(hdr,fspec);
Error in ==> fast_selxavg3 at 634
MRIwrite(rrunmri,fname);
>> ------------------------------------------
ERROR: fast_selxavg3() failed\n
Does anyone know what might be going on and/or how I can correct the
problem?
Thanks,
Avram
--
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Avram Holmes
Department of Psychology
Harvard University
1210 William James Hall Phone:(617) 495-0790
33 Kirkland Street Fax:(617) 495-3728
Cambridge, MA 02138, USA Email: hol...@fas.harvard.edu
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