Dear FS experts I had run recon-all -long on two time points and would like to subtract the cortical thickness maps of the two time points.
Do the two ?h.thickness maps of the different time points are already in the same space so that they can be directly subtracted in MATLAB? Or Do I have to use mri_surf2surf to register them before I can subtract them? Do you recommend smoothing the thickness maps? When looking at T1.mgz with the overlaying aseg the images of the two time points are not in the same stereotactic space: hence, I would like to known whether this is also the case for the thickness maps. Sorry for reposting this question Thanks Regards Jürgen ---------------------------------------------------------------------------- Juergen Haenggi Ph.D. (Dr. des.) Division Neuropsychology Institute of Psychology University of Zurich Binzmuehlestrasse 14, PO Box 25 8050 Zurich, Switzerland 0041 44 635 73 97 (phone office) 0041 76 445 86 84 (phone mobile) 0041 44 635 74 09 (fax office) BIN 4.D.04 (office room number) j.haenggi[at]psychologie.uzh.ch (email) http://www.psychologie.uzh.ch/neuropsy/ (website) http://www.juergenhaenggi.ch (private website) This e-mail (and any attachment/s) contains confidential and/or privileged information. If you are not the intended recipient (or have received this e-mail in error) please notify the sender immediately and destroy this e-mail. Any unauthorised copying, disclosure or distribution of the material in this e-mail is strictly forbidden. ---------------------------------------------------------------------------- _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
