What version of freesurfer are you using now and what version was used to process the data? I suspect mixed versions were used. You can rerun with the -clean-aseg flag to start again.
On Wed, 2009-02-11 at 10:43 -0500, Dankner, Nathan (NIH/NIMH) [F] wrote: > Hello all, > > I have recently been running some scans with very few defects, but have been > encountering a particular error message on occasion when I try to run it > through autorecon2 and autorecon3 after a bit of manual correction. The > error output is: > > MRI_fill: could not read segmentation from aseg.auto_noCC.mgz > reading segmented volume aseg.auto_noCCseg.mgz... > ERROR: cannot find [subject path]/aseg.auto_noCCseg.mgz > No such file or directory > > Any suggestions as to why this is happening? > > Nathan > > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
