Hi Matt,

the methodologies are described in those papers. Sorry, I don't think there's any one or two paper summary - it's just too much stuff over the years (topology correction, segmentation, surface analysis, morphing, etc....).

Bruce

On Fri, 12 Sep 2008, Matt Clarkson wrote:

Dear everyone,

Hopefully someone can help me. If I do "recon-all --help" i can see a list of 31 steps for the main cortical thickness pipeline. Does anyone have a list that links each of the 31 steps to the most current methodology paper?

I've been reading most of the methodology papers referenced in the wiki, but the software has clearly evolved over the years, and even though you can read the wiki, and trawl through log files, I want to be absolutely sure that for each step, I know exactly what algorithm is applied. Has anyone gone through this before?

Thanks in advance,

Matt

Matt Clarkson
Senior Research Associate
Dementia Research Centre
UCL
Institute Of Neurology
Queen Square
London WC1N 3BG

[EMAIL PROTECTED]
Tel: 08451 555 000 ext. 723653
Fax: 020 7676 2066


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