Mark, what context are you running it in? Ie, are you running it by
itself or was it called by something else. It looks like the subject's
surface and the overlay that you are smoothing have different number of
vertices.
doug
Mark J. Pearrow wrote:
Hi all,
I've run into a snag whilst running mris_fwhm:
$ mris_fwhm --i <snip>/all.nii --s <SUBJID> --hemi rh --sum <snip>/
fwhm.sum
<SUBJID> rh white
Number of vertices 136129
Number of faces 272254
Total area 88745.070312
GroupSurface 0
FIX_VERTEX_AREA 1
AvgVtxArea 0.651919
AvgVtxDist 0.883205
StdVtxDist 0.255280
Polynomial detrending, order = 0
Computing spatial AR1
ERROR: MRISar1: Surf/Src dimension mismatch.
Segmentation fault
All of the unpacking, reconstruction, and preprocessing up till that
point have all been done using a pretty typical FS stream (with the
exception of not smoothing in the volume) using FS 4.0.5.
The segfault happens with both the mris_fwhm binary that comes with
FS 4.0.5 and with the one I built from last night's CVS tree. I
haven't run it under a debugger yet but was wondering if this has
been seen before, etc.
mjp
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
--
Douglas N. Greve, Ph.D.
MGH-NMR Center
[EMAIL PROTECTED]
Phone Number: 617-724-2358
Fax: 617-726-7422
In order to help us help you, please follow the steps in:
surfer.nmr.mgh.harvard.edu/fswiki/BugReporting
_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
