Can you send the recon-all.log file? I can examine it for error messages. Also, do the input files contain orientation info? run this on your subject input volume:
mri_info 001.mgz and send me the output. On Mon, 2006-07-17 at 13:58 -0700, Jake Freimer wrote: > I have run several instances of autorecon2 and have only got left > hemisphere data. The log file says that autorecon finished with errors > but I can not find where to find these errors. I believe that the > problem is the way the data being fed in is oriented so I was > wondering how I should reorient it to get it to work. > Thanks > Jake > _______________________________________________ > Freesurfer mailing list > Freesurfer@nmr.mgh.harvard.edu > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
