I only recently (ie, last weekish) added a flag to keep the edits when wm is edited with aseg. You can get a new copy of recon all from:

ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/recon-all-nmr

dogu

Sasha Wolosin wrote:

Dear all,

 When we run autorecon2-wm it doesn't seem to be reading the editing
done in the Edit WM With ASeg step.  Looking at wm.mgz, none of the
filling that we see after autorecon2 is present after autorecon2-wm. What's going wrong?

Thanks,
Marin


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