For this installation of Freesurfer, you would need to edit csurf to
change the line '/usr/sw/bin/tixwish4.1.8.3' to point to your own
installation of tixwish, which is not distributed with this freesurfer
installation. The newer dev installation does include it though, so you
may have better luck installing it.
On Mon, 2005-10-10 at 16:28 -0500, Xander Meadow wrote:
>
>
> ______________________________________________________________________
>
> Hi,
>
> Since I'm running Panther I downloaded: freesurfer-Darwin-panther-
> v2.0.tar.gz and tried to set it up. I got it downloaded and I set up
> the SetUpFreeSurfer.csh file. But at the beginning of the
> freesurfer/bin/csurf file is the following lines:
>
> # force local (next line not seen by tcl) \
> exec /usr/sw/bin/tixwish4.1.8.3 $0 ${1+"$@"} # goto tcl8.3
> #exec $LOCAL_DIR/bin/`uname -s`/tixwish4.1.7.4 $0 ${1+"$@"} # goto
> tcl7.4
>
> I'm not sure what to make of them except that I get an error when I
> try to run csurf because I don't have /usr/sw/bin/tixwish4.1.8.3. Am
> I downloading the wrong file? Or do I just have the settings messed
> up again? Thanks very much.
>
> >Xander
>
> On Oct 7, 2005, at 12:49 PM, Nick Schmansky wrote:
>
> Xander,
>
> I haven't encountered this error message, and can't seem to
> track down
> its origin. Is it possible to upgrade your 2003 version of
> freesurfer
> to a newer version? If not, if you can email me the csurf
> file found in
> the $FREESURFER/bin directory, I might be able to figure out
> the
> problem.
>
> Nick
>
> On Thu, 2005-10-06 at 22:50 +0700, [EMAIL PROTECTED] wrote:
> Hi,
>
> I've got a Mac box running OS X 10.3.9 and
> Freesurfer ,v 1.3 2003/08/05 19:
> 19:16, and just recently when I start up freesurfer I
> get an error. To reproduce
> the error I do:
>
> source /Applications/Freesurfer/SetUpFreeSurfer.csh
> Setting up enviroment for FreeSurfer/FS-FAST
> $Id: FreeSurferEnv.csh,v 1.3 2003/08/05 19:19:16
> kteich Exp $
> FREESURFER_HOME /Applications/Freesurfer
> FSFAST_HOME /Applications/Freesurfer/fsfast
> AFNI_DIR /Applications/Freesurfer/afni
> FSL_DIR /Applications/Freesurfer/fsl
> SUBJECTS_DIR /Users/xmeadow/subjects
> csurf &
> Application initialization failed: invalid command
> name "PNG"
>
> Then Freesurfer opens up normally. I was just
> wondering what this error
> message means. I've looked online and seen that PNG
> stands for 'Portable
> Network Graphics' (I think), but I don't know if I
> have it installed or if I need it
> installed. Is there something I can do to get
> Freesurfer to load without errors?
> Thanks very much.
>
> Xander
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
>
>
>
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