Since I'm running Panther I downloaded: <x-tad-smaller>freesurfer-Darwin-panther-v2.0.tar.gz</x-tad-smaller> and tried to set it up. I got it downloaded and I set up the SetUpFreeSurfer.csh file. But at the beginning of the freesurfer/bin/csurf file is the following lines:
# force local (next line not seen by tcl) \
exec /usr/sw/bin/tixwish4.1.8.3 $0 ${1+"$@"} # goto tcl8.3
#exec $LOCAL_DIR/bin/`uname -s`/tixwish4.1.7.4 $0 ${1+"$@"} # goto tcl7.4
I'm not sure what to make of them except that I get an error when I try to run csurf because I don't have /usr/sw/bin/tixwish4.1.8.3. Am I downloading the wrong file? Or do I just have the settings messed up again? Thanks very much.
>Xander
On Oct 7, 2005, at 12:49 PM, Nick Schmansky wrote:
Xander,
I haven't encountered this error message, and can't seem to track down
its origin. Is it possible to upgrade your 2003 version of freesurfer
to a newer version? If not, if you can email me the csurf file found in
the $FREESURFER/bin directory, I might be able to figure out the
problem.
Nick
On Thu, 2005-10-06 at 22:50 +0700, [EMAIL PROTECTED] wrote:
Hi,
I've got a Mac box running OS X 10.3.9 and Freesurfer ,v 1.3 2003/08/05 19:
19:16, and just recently when I start up freesurfer I get an error. To reproduce
the error I do:
source /Applications/Freesurfer/SetUpFreeSurfer.cshSetting up enviroment for FreeSurfer/FS-FAST
$Id: FreeSurferEnv.csh,v 1.3 2003/08/05 19:19:16 kteich Exp $
FREESURFER_HOME /Applications/Freesurfer
FSFAST_HOME /Applications/Freesurfer/fsfast
AFNI_DIR /Applications/Freesurfer/afni
FSL_DIR /Applications/Freesurfer/fsl
SUBJECTS_DIR /Users/xmeadow/subjects
csurf &Application initialization failed: invalid command name "PNG"
Then Freesurfer opens up normally. I was just wondering what this error
message means. I've looked online and seen that PNG stands for 'Portable
Network Graphics' (I think), but I don't know if I have it installed or if I need it
installed. Is there something I can do to get Freesurfer to load without errors?
Thanks very much.
Xander_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
