Tony, See also the on-line tutorial for converting DICOMs to mgz:
https://surfer.nmr.mgh.harvard.edu/fswiki/FsTutorial/Conversion On Mon, 2005-09-26 at 12:17 -0400, Doug Greve wrote: > > You should have a file called 1801_4/mri/orig/001.mgz. This is what it > uses as input data. If you have more than one run, then label the 2nd > run as 002.mgz, etc. > > doug > > > > > Anthony Cacace wrote: > > >Freesurfer staff, > > > >We're relatively new at running freesurfer, everything works fine until > >we run: > > > >recon-all -subjid 1801-4 -autorecon1 -mgz > > > >then we get the message: > > > >no run data found in: > > > >/home/amc/freesurfer_new/freesurfer/subjects/1801-4/mri > > > >Is there something simple here that we're missing? > > > >Tony > > > >_______________________________________________ > >Freesurfer mailing list > >Freesurfer@nmr.mgh.harvard.edu > >https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer > > > > > > > > > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
