You should have a file called 1801_4/mri/orig/001.mgz. This is what it
uses as input data. If you have more than one run, then label the 2nd
run as 002.mgz, etc.
doug
Anthony Cacace wrote:
Freesurfer staff,
We're relatively new at running freesurfer, everything works fine until
we run:
recon-all -subjid 1801-4 -autorecon1 -mgz
then we get the message:
no run data found in:
/home/amc/freesurfer_new/freesurfer/subjects/1801-4/mri
Is there something simple here that we're missing?
Tony
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--
Douglas N. Greve, Ph.D.
MGH-NMR Center
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Fax: 617-726-7422
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