p.s. the flags should always come before the mandatory command line args.
On Fri, 16 Sep 2005, Fornito, Alexander wrote:
Hi, I'm using the 20050905 distribution and it seems like mris_anatomical_stats is trying to look for cor files, when I've run my analyses using mgz. Is there a way to change this, or have I got it wrong?. Here is the output mris_anatomical_stats 1000001 lh white reading volume /data/flanders/work/alex/freesurfer/subjects_fe/1000001/mri/wm... corRead(): can't open file /data/flanders/work/alex/freesurfer/subjects_fe/1000001/mri/wm/COR-.info mris_anatomical_stats: could not read input volume /data/flanders/work/alex/freesurfer/subjects_fe/1000001/mri/w Also, I've been having trouble using the -f and -log options (the program runs, but I can't seem to create an output file) with some other surfaces (that I have used cor with). Could you pls give me an example of how to use these flags in the command line? I tried: mris_anatomical_stats 1000027 lh white -l 1000027/label/1000027_roi.label -f roi_stats.log (and I also tried putting the options right after mris_anatomical_stats). Thanks, Alex _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
_______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
