mri_segment -wm_low <low val> -gray_hi <hi val> <input vol> <output vol>

On Tue, 8 Mar 2005, Marie Schaer wrote:



The ones in csurf-Expert Preferences Settings Menu, under WMFilter: white low
limit and gray high limit.

Thanks,

Marie

Quoting Bruce Fischl <[EMAIL PROTECTED]>:

what preferences exactly?

On Tue, 8 Mar 2005, Marie Schaer wrote:


Hi everybody,

I am using Freesurfer to measure the cortical thickness, and I was
wondering if
there was any way to specify the WMFilter Expert Preferences when running
recon-all -stage1 from the commandline?

Thanks in advance,

Marie Schaer


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