Estimad@s colegas,
Ya está abierta la inscripción al curso de Transmitting Science
"Manipulation of NGS Data for Genomic and Population Genetics Analyses".
Fechas y horario: sesiones en directo el 5, 7, 9, 12 y 14 de mayo, 2024;
de 13:00 a 17:00 (zona horaria de Madrid).
Este curso ofrece una introducción completa al análisis de datos de
secuenciación de nueva generación (NGS), guiando a los participantes a
través de tecnologías de segunda y tercera secuenciación, operaciones de
línea de comandos y gestión de datos. Los temas clave incluyen la
evaluación de la calidad, la detección de variantes y los análisis
genómicos a gran escala.
Los participantes adquirirán experiencia práctica con procesos
computacionales y explorarán enfoques analíticos para abordar diversas
cuestiones de investigación biológica.
Página web del curso:
https://www.transmittingscience.com/courses/genetics-and-genomics/manipulation-ngs-data-genomic-population-genetics-analyses/
[1]
Programa del curso (en inglés, que es el idioma en el que se impartirá
el mismo):
* Introduction to NGS sequencing platforms.
* Introduction to basic command lines.
* Basic raw data manipulations (counting sequences, listing files).
* Raw data QC & Cleaning.
* Mapping: principle, tools, execution, cleaning, data control,…
* SNP calling: raw calling, cleaning calling, filtering.
* VCF manipulations: filtering on MAF, heterozygosity…
* Impact of SNPs on genes.
* Population genomics using sNMF.
* Assembling genomes with long reads
* Comparing assembled genomes and SV detection
* Testing tools and different conditions to answer different
biological questions.
* Discussion about bioinformatic strategies related with sientific
projects of participants.
Un cordial saludo,
Sole
--
Soledad De Esteban-Trivigno, PhD
Director
Transmitting Science
www.transmittingscience.com/courses
X @SoleDeEsteban
Orcid: https://orcid.org/0000-0002-2049-0890
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Links:
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[1]
https://www.transmittingscience.com/courses/genetics-and-genomics/manipulation-ngs-data-genomic-population-genetics-analyses/
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