Hello,

I finally figured out my schedule for this summer and the conclusion is that I 
would be able to dedicate about 20 hours per week for the GSoC project. As far 
as I understand, this is about half of what is expected from a GSoC student, so 
unfortunately I think I should not apply this year. I want to contribute to the 
Commons Math library nonetheless.

Best regards,
Alina
      From: Thomas Neidhart <thomas.neidh...@gmail.com>
 To: Commons Developers List <dev@commons.apache.org> 
 Sent: Tuesday, February 3, 2015 1:17 AM
 Subject: Re: [Math] Contributions to the clustering module (maybe GSoC)
   
On 02/02/2015 10:36 PM, Alina Ciobanu wrote:
> Hello Thomas,
> 
> 
> Thank you for the answer. I hope I will be able to clarify my schedule for 
> the summer in about a week from now and I will decide whether I should apply 
> to GSoC this year or not. I will let you know as soon as I can. Until then, I 
> will shortly describe my first ideas below:
> 
> 
> 1. Spectral clustering [1] - It basically maps the data in a 
> lower-dimensional space (relying on the eigenvectors of the similarity 
> matrix) and performs (k-means) clustering there. This method can resolve a 
> wide variety of problems, regardless of the form of the clusters. It could be 
> implemented efficiently using the Commons Math linear algebra module.
> 
> 
> 2. Mean shift algorithm [2] - I didn't grasp all the details of the algorithm 
> yet, but I find it very interesting. As far as I understand, it has been 
> primarily used in pattern recognition and computer vision. I discovered it 
> while searching for an algorithm that does not require the number of clusters 
> as input parameter. I think it would be a good addition to Commons Math 
> besides DBSCAN, from this point of view.
> 
> 
> 3. Clustering evaluation methods3.1. The Silhouette Coefficient [3] - 
> accounts for the intra-cluster and inter-cluster distance to assign a score 
> in [-1, 1] to a clustering.3.2. External clustering evaluation [4] - when 
> gold standard is available for the clustered data, it can be used to asses 
> the performance of a clustering algorithm.
> 
> 
> Suggestions are more than welcome. If you have requests from users for 
> specific clustering algorithms, please let me know.

You proposals sound good, as a pointer to already existing feature
requests you can take a look at:

 * Optics algorithm - https://issues.apache.org/jira/browse/MATH-1190
 * HAC algorithm - https://issues.apache.org/jira/browse/MATH-959

Cluster evaluation would also be very interesting, I already wanted to
do something in this direction but could not find the time.

btw. by coincidence, we received a reminder about this years GSOC just
today, the deadline is 13-02-2015 to submit a project proposal with
project ideas.



Thomas


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