Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
ac1385c0 by Andreas Tille at 2020-07-20T13:44:26+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,34 +1,34 @@
-Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
+Last-Update: Mon, 20 Jul 2020 13:42:04 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
dcmtk | 171 | {covid-19,imaging}
|
orthanc | 89 | {covid-19,imaging,practice}
|
- gdcm | 44 | {imaging-dev}
|
- orthanc-wsi | 43 |
{his,practice,covid-19,laboratory,imaging,oncology} |
+ orthanc-wsi | 42 |
{his,practice,covid-19,laboratory,imaging,oncology} |
+ gdcm | 41 | {imaging-dev}
|
htsjdk | 30 | {bio-dev}
|
+ dicom3tools | 23 | {imaging}
|
dcm2niix | 22 | {imaging}
|
- dicom3tools | 22 | {imaging}
|
- dicomscope | 20 | {imaging}
|
+ dicomscope | 19 | {imaging}
|
gnumed-server | 18 | {practice,covid-19}
|
gdcm | 15 | {covid-19,imaging}
|
- ngs-sdk | 14 | {bio-dev}
|
+ ngs-sdk | 15 | {bio-dev}
|
gdcm | 13 | {imaging-dev}
|
- insighttoolkit4 | 13 | {imaging-dev}
|
+ insighttoolkit4 | 12 | {imaging-dev}
|
invesalius | 11 | {imaging}
|
+ ngs-sdk | 11 | {bio-dev}
|
jebl2 | 10 | {bio-dev}
|
- minc-tools | 10 | {imaging}
|
- ngs-sdk | 10 | {bio-dev}
|
pixelmed | 10 | {imaging}
|
adun.app | 9 | {bio}
|
lagan | 9 | {bio}
|
melting | 9 | {bio,cloud}
|
+ minc-tools | 9 | {imaging}
|
psychopy | 9 | {psychology}
|
vtk-dicom | 9 | {imaging}
|
orthanc-webviewer | 8 | {imaging}
|
dicompyler | 7 | {oncology}
|
+ king | 7 | {imaging,typesetting}
|
libdivsufsort | 7 | {bio-dev}
|
- libminc | 7 | {imaging-dev}
|
openslide | 7 | {imaging}
|
orthanc-dicomweb | 7 | {imaging,covid-19}
|
plastimatch | 7 | {imaging}
|
@@ -38,13 +38,12 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
biomaj3-cli | 6 | {cloud}
|
biosig4c++ | 6 | {physics,imaging}
|
ea-utils | 6 | {bio}
|
- king | 6 | {imaging,typesetting}
|
+ libminc | 6 | {imaging-dev}
|
obitools | 6 | {bio}
|
orthanc-mysql | 6 | {imaging}
|
paraclu | 6 | {cloud,bio}
|
- stacks | 6 | {bio}
|
- anfo | 5 | {bio,cloud}
|
biomaj3-daemon | 5 | {bio}
|
+ elastix | 5 | {imaging}
|
fastlink | 5 | {cloud,bio}
|
getdata | 5 | {bio}
|
librg-utils-perl | 5 | {bio}
|
@@ -57,7 +56,7 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
sibsim4 | 5 | {bio,cloud}
|
sigma-align | 5 | {bio-phylogeny,cloud,bio}
|
zalign | 5 | {cloud,bio}
|
- elastix | 4 | {imaging}
|
+ anfo | 4 | {bio,cloud}
|
gatb-core | 4 | {bio}
|
king-probe | 4 | {bio}
|
mauve-aligner | 4 | {bio}
|
@@ -70,6 +69,7 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
piler | 4 | {bio}
|
scythe | 4 | {bio}
|
spread-phy | 4 | {bio-phylogeny,bio}
|
+ stacks | 4 | {bio}
|
transtermhp | 4 | {bio}
|
alter-sequence-alignment | 3 | {bio}
|
bandage | 3 | {bio}
|
@@ -81,7 +81,6 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
embassy-domainatrix | 3 | {cloud,bio}
|
embassy-domalign | 3 | {cloud,bio}
|
embassy-domsearch | 3 | {bio,cloud}
|
- ghmm | 3 | {bio}
|
ipig | 3 | {bio}
|
libncl | 3 | {bio}
|
librdp-taxonomy-tree-java | 3 | {bio-dev}
|
@@ -126,6 +125,7 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
estscan | 2 | {bio}
|
fastml | 2 | {bio}
|
fsm-lite | 2 | {bio}
|
+ ghmm | 2 | {bio}
|
harvest-tools | 2 | {bio}
|
hinge | 2 | {bio}
|
jellyfish1 | 2 | {bio}
|
@@ -177,7 +177,6 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
libhmsbeagle | 1 | {bio-dev}
|
libvistaio | 1 | {imaging-dev}
|
logol | 1 | {bio}
|
- ncbi-vdb | 1 | {bio-dev}
|
opensurgsim | 1 | {imaging-dev}
|
papyrus | 1 | {imaging-dev}
|
phipack | 1 | {bio}
|
@@ -187,7 +186,6 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
seqan | 1 | {bio-dev}
|
sift | 1 | {bio}
|
stringtie | 1 | {bio,covid-19}
|
- thesias | 1 | {bio,covid-19}
|
trace2dbest | 1 | {bio}
|
velvetoptimiser | 1 | {bio}
|
volpack | 1 | {imaging-dev}
|
@@ -241,6 +239,7 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
mssstest | 0 | {tools}
|
murasaki | 0 | {bio}
|
nanosv | 0 | {bio,covid-19}
|
+ ncbi-vdb | 0 | {bio-dev}
|
opencfu | 0 | {laboratory}
|
orthanc-imagej | 0 | {imaging}
|
parallel-fastq-dump | 0 | {covid-19}
|
@@ -248,8 +247,8 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
pbseqlib | 0 | {bio-dev}
|
pilercr | 0 | {bio}
|
quicktree | 0 | {bio,covid-19,bio-phylogeny}
|
- relion | 0 | {bio}
|
relion | 0 | {bio-dev}
|
+ relion | 0 | {bio}
|
sambamba | 0 | {bio}
|
sbmltoolbox | 0 | {bio-dev}
|
seq-gen | 0 | {bio}
|
@@ -259,6 +258,7 @@ Last-Update: Mon, 20 Jul 2020 01:42:04 +0000
smrtanalysis | 0 | {covid-19,bio}
|
spaln | 0 | {bio,covid-19}
|
srf | 0 | {bio-dev}
|
+ thesias | 0 | {bio,covid-19}
|
tophat-recondition | 0 | {bio,covid-19}
|
varna | 0 | {bio}
|
varscan | 0 | {covid-19,bio}
|
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ac1385c0d9a4e7667d5c9c66fcb3d95d88ade064
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/ac1385c0d9a4e7667d5c9c66fcb3d95d88ade064
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