Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
06301692 by Andreas Tille at 2020-07-17T13:44:13+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,43 +1,44 @@
-Last-Update: Fri, 17 Jul 2020 01:42:04 +0000
+Last-Update: Fri, 17 Jul 2020 13:42:03 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 171 | {covid-19,imaging}
|
- orthanc | 88 | {covid-19,imaging,practice}
|
- gdcm | 46 | {imaging-dev}
|
- orthanc-wsi | 43 |
{his,practice,covid-19,laboratory,imaging,oncology} |
+ dcmtk | 172 | {covid-19,imaging}
|
+ orthanc | 89 | {covid-19,imaging,practice}
|
+ gdcm | 47 | {imaging-dev}
|
+ orthanc-wsi | 42 |
{his,practice,covid-19,laboratory,imaging,oncology} |
htsjdk | 31 | {bio-dev}
|
- dcm2niix | 22 | {imaging}
|
- dicom3tools | 22 | {imaging}
|
- dicomscope | 19 | {imaging}
|
- gnumed-server | 18 | {practice,covid-19}
|
+ dcm2niix | 21 | {imaging}
|
+ dicom3tools | 21 | {imaging}
|
+ dicomscope | 18 | {imaging}
|
+ gnumed-server | 17 | {practice,covid-19}
|
ngs-sdk | 15 | {bio-dev}
|
- gdcm | 13 | {covid-19,imaging}
|
+ gdcm | 14 | {covid-19,imaging}
|
insighttoolkit4 | 13 | {imaging-dev}
|
- invesalius | 13 | {imaging}
|
gdcm | 12 | {imaging-dev}
|
- pixelmed | 12 | {imaging}
|
+ invesalius | 12 | {imaging}
|
+ pixelmed | 11 | {imaging}
|
jebl2 | 10 | {bio-dev}
|
- minc-tools | 10 | {imaging}
|
+ ngs-sdk | 10 | {bio-dev}
|
adun.app | 9 | {bio}
|
lagan | 9 | {bio}
|
- ngs-sdk | 9 | {bio-dev}
|
+ minc-tools | 9 | {imaging}
|
psychopy | 9 | {psychology}
|
- vtk-dicom | 9 | {imaging}
|
libdivsufsort | 8 | {bio-dev}
|
melting | 8 | {bio,cloud}
|
- openslide | 8 | {imaging}
|
orthanc-webviewer | 8 | {imaging}
|
- plastimatch | 8 | {imaging}
|
- biosig4c++ | 7 | {physics,imaging}
|
+ vtk-dicom | 8 | {imaging}
|
dicompyler | 7 | {oncology}
|
libminc | 7 | {imaging-dev}
|
+ openslide | 7 | {imaging}
|
orthanc-dicomweb | 7 | {imaging,covid-19}
|
+ plastimatch | 7 | {imaging}
|
stacks | 7 | {bio}
|
treeview | 7 | {bio-phylogeny,bio}
|
biojava-live | 6 | {bio-dev}
|
biomaj3-cli | 6 | {cloud}
|
+ biosig4c++ | 6 | {physics,imaging}
|
ea-utils | 6 | {bio}
|
+ obitools | 6 | {bio}
|
orthanc-mysql | 6 | {imaging}
|
paraclu | 6 | {cloud,bio}
|
anfo | 5 | {bio,cloud}
|
@@ -48,7 +49,6 @@ Last-Update: Fri, 17 Jul 2020 01:42:04 +0000
king | 5 | {imaging,typesetting}
|
librg-utils-perl | 5 | {bio}
|
mlv-smile | 5 | {bio,cloud}
|
- obitools | 5 | {bio}
|
orthanc-postgresql | 5 | {imaging}
|
phyutility | 5 | {bio,cloud}
|
pymia | 5 | {imaging-dev}
|
@@ -68,7 +68,6 @@ Last-Update: Fri, 17 Jul 2020 01:42:04 +0000
neobio | 4 | {cloud,bio}
|
nutsqlite | 4 | {tools}
|
piler | 4 | {bio}
|
- qrisk2 | 4 | {practice}
|
scythe | 4 | {bio}
|
spread-phy | 4 | {bio-phylogeny,bio}
|
transtermhp | 4 | {bio}
|
@@ -85,6 +84,7 @@ Last-Update: Fri, 17 Jul 2020 01:42:04 +0000
ipig | 3 | {bio}
|
libncl | 3 | {bio}
|
librdp-taxonomy-tree-java | 3 | {bio-dev}
|
+ libsbml | 3 | {bio-dev}
|
microbegps | 3 | {bio}
|
multiqc | 3 | {bio,covid-19}
|
perm | 3 | {cloud,bio}
|
@@ -131,12 +131,12 @@ Last-Update: Fri, 17 Jul 2020 01:42:04 +0000
lamarc | 2 | {bio}
|
libctapimkt | 2 | {practice}
|
libpal-java | 2 | {bio-dev}
|
- libsbml | 2 | {bio-dev}
|
maffilter | 2 | {bio}
|
metaphlan2 | 2 | {bio}
|
murasaki | 2 | {bio}
|
ncbi-vdb | 2 | {bio-dev}
|
openslide | 2 | {imaging-dev}
|
+ oscar | 2 | {practice,tools,data}
|
patman | 2 | {bio}
|
pbdagcon | 2 | {bio}
|
phast | 2 | {bio}
|
@@ -181,7 +181,7 @@ Last-Update: Fri, 17 Jul 2020 01:42:04 +0000
logol | 1 | {bio}
|
ngs-sdk | 1 | {bio-dev}
|
opensurgsim | 1 | {imaging-dev}
|
- oscar | 1 | {practice,tools,data}
|
+ papyrus | 1 | {imaging-dev}
|
pbcopper | 1 | {bio-dev}
|
phipack | 1 | {bio}
|
plasmidseeker | 1 | {bio}
|
@@ -229,12 +229,12 @@ Last-Update: Fri, 17 Jul 2020 01:42:04 +0000
libmialm | 0 | {imaging-dev}
|
libmuscle | 0 | {bio-dev}
|
libncl | 0 | {bio-dev}
|
- libpll | 0 | {bio-dev}
|
libpsortb | 0 | {bio-dev}
|
libqes | 0 | {bio-dev}
|
libseqlib | 0 | {bio-dev}
|
libstatgen | 0 | {bio-dev}
|
libxdf | 0 | {imaging-dev}
|
+ lighter | 0 | {bio,covid-19}
|
metastudent-data | 0 | {bio}
|
metastudent-data-2 | 0 | {bio}
|
miaviewit | 0 | {imaging-dev}
|
@@ -244,13 +244,12 @@ Last-Update: Fri, 17 Jul 2020 01:42:04 +0000
nanosv | 0 | {bio,covid-19}
|
opencfu | 0 | {laboratory}
|
orthanc-imagej | 0 | {imaging}
|
- papyrus | 0 | {imaging-dev}
|
parallel-fastq-dump | 0 | {covid-19}
|
pbseqlib | 0 | {bio-dev}
|
pilercr | 0 | {bio}
|
quicktree | 0 | {bio,covid-19,bio-phylogeny}
|
- relion | 0 | {bio-dev}
|
relion | 0 | {bio}
|
+ relion | 0 | {bio-dev}
|
sambamba | 0 | {bio}
|
sbmltoolbox | 0 | {bio-dev}
|
seq-gen | 0 | {bio}
|
@@ -263,6 +262,7 @@ Last-Update: Fri, 17 Jul 2020 01:42:04 +0000
tophat-recondition | 0 | {bio,covid-19}
|
varna | 0 | {bio}
|
varscan | 0 | {covid-19,bio}
|
+ vienna-rna | 0 | {bio,covid-19}
|
vtk-dicom | 0 | {imaging-dev}
|
wtdbg2 | 0 | {covid-19}
|
bustools | -1 | {bio,covid-19}
|
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/06301692c4cbdc733886b0cb3f05d1752a9b0946
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/06301692c4cbdc733886b0cb3f05d1752a9b0946
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