Dear Andreas, Will give it a look asap.
Best, Julien. On Fri, Mar 8, 2019 at 9:34 AM Julien Yann Dutheil < julien.duth...@univ-montp2.fr> wrote: > Dear Andreas, > > Will give it a look asap. > > Best, > > Julien. > > On Fri, Mar 8, 2019 at 6:30 AM Andreas Tille <ti...@debian.org> wrote: > >> Hi Julien, >> >> after fixing bug #923457 I realised that the package does not >> build on all architectures[1]. S390x fails with[2] >> >> 4/14 Test #5: test_likelihood_nh ...............***Failed 2.44 sec >> >> / 1 >> - 2 >> \ 3 >> - 4 >> / 5 >> - 6 >> \ 7 >> - 8 >> / 9 >> - 10 >> \ 11 nodes loaded. >> Theta0 set to 0.444785 >> Theta1 set to 0.137341 >> Theta2 set to 0.219281 >> Theta3 set to 0.759382 >> Theta4 set to 0.549516 >> Theta5 set to 0.925583 >> Theta6 set to 0.527333 >> Theta7 set to 0.891561 >> Theta8 set to 0.331932 >> Theta9 set to 0.523327 >> Initializing data structure............: Done. >> Number of distinct sites...............: 363 >> Initializing data structure............: Done. >> Number of distinct sites...............: 363 >> >> Optimizing... / 1 >> Optimizing... - 2 >> Optimizing... \ 3 >> Optimizing... - 4 >> Optimizing... / 5 >> Optimizing... - 6 >> Optimizing... \ 7 >> Optimizing... - 8 >> Optimizing... / 9 >> Optimizing... - 10 >> Optimizing... \ 11 >> Optimizing... - 12 >> Optimizing... / 13 >> Optimizing... - 14 >> >> >> Optimizing... / 1 >> Optimizing... - 2 >> Optimizing... \ 3 >> Optimizing... - 4 >> Optimizing... / 5 >> Optimizing... - 6 >> Optimizing... \ 7 >> Optimizing... - 8 >> Optimizing... / 9 >> Optimizing... - 10 >> Optimizing... \ 11 >> Optimizing... - 12 >> Optimizing... / 13 >> Optimizing... - 14 >> >> 15: 5347.92 15: 5347.92 >> 0.516673 0.516673 >> 0.184681 0.184681 >> 0.209158 0.209158 >> 0.795359 0.795359 >> 0.489372 0.489372 >> 0.918414 0.918414 >> 0.489537 0.489537 >> 0.913968 0.913968 >> 0.180359 0.180359 >> 0.797456 0.797456 >> Initializing data structure............: Done. >> Number of distinct sites...............: 365 >> Initializing data structure............: Done. >> Number of distinct sites...............: 365 >> >> Optimizing... / 1 >> Optimizing... - 2 >> Optimizing... \ 3 >> Optimizing... - 4 >> Optimizing... / 5 >> Optimizing... - 6 >> Optimizing... \ 7 >> Optimizing... - 8 >> Optimizing... / 9 >> Optimizing... - 10 >> Optimizing... \ 11 >> Optimizing... - 12 >> Optimizing... / 13 >> Optimizing... - 14 >> Optimizing... \ 15 >> Optimizing... - 16 >> Optimizing... / 17 >> >> >> Optimizing... / 1 >> Optimizing... - 2 >> Optimizing... \ 3 >> Optimizing... - 4 >> Optimizing... / 5 >> Optimizing... - 6 >> Optimizing... \ 7 >> Optimizing... - 8 >> Optimizing... / 9 >> Optimizing... - 10 >> Optimizing... \ 11 >> Optimizing... - 12 >> Optimizing... / 13 >> Optimizing... - 14 >> Optimizing... \ 15 >> Optimizing... - 16 >> Optimizing... / 17 >> >> 18: 5391.43 18: 5391.43 >> 0.60777 0.60777 >> 0.127151 0.127151 >> 0.189039 0.189039 >> 0.788612 0.788612 >> 0.564763 0.564763 >> 0.941319 0.941319 >> 0.565297 0.565297 >> 0.844854 0.844854 >> 0.357532 0.357532 >> 0.717998 0.717998 >> Initializing data structure............: Done. >> Number of distinct sites...............: 375 >> Initializing data structure............: Done. >> Number of distinct sites...............: 375 >> >> Optimizing... / 1 >> Optimizing... - 2 >> Optimizing... \ 3 >> Optimizing... - 4 >> Optimizing... / 5 >> Optimizing... - 6 >> Optimizing... \ 7 >> Optimizing... - 8 >> Optimizing... / 9 >> Optimizing... - 10 >> Optimizing... \ 11 >> Optimizing... - 12 >> Optimizing... / 13 >> Optimizing... - 14 >> >> >> Optimizing... / 1 >> Optimizing... - 2 >> Optimizing... \ 3 >> Optimizing... - 4 >> Optimizing... / 5 >> Optimizing... - 6 >> Optimizing... \ 7 >> Optimizing... - 8 >> Optimizing... / 9 >> Optimizing... - 10 >> Optimizing... \ 11 >> Optimizing... - 12 >> Optimizing... / 13 >> Optimizing... - 14 >> >> 15: 5401.83 15: 5401.83 >> 0.419181 0.419181 >> 0.140299 0.140299 >> 0.295 0.295 >> 0.900203 0.900203 >> 0.411605 0.411605 >> 0.919716 0.919716 >> 0.563041 0.563041 >> 0.813833 0.813833 >> 0.194868 0.194868 >> 0.801315 0.801315 >> 0.444785 0.514541 0.514541 >> 0.137341 0.15071 0.15071 >> 0.219281 0.231066 0.231066 >> 0.759382 0.828058 0.828058 >> 0.549516 0.48858 0.48858 >> 0.925583 0.926483 0.926483 >> 0.527333 0.539292 0.539292 >> 0.891561 0.857552 0.857552 >> 0.331932 0.244253 0.244253 >> 0.523327 0.772256 0.772256 >> >> >> ... >> >> 93% tests passed, 1 tests failed out of 14 >> >> Total Test time (real) = 31.15 sec >> >> The following tests FAILED: >> 5 - test_likelihood_nh (Failed) >> >> >> I remember that I once had even a test failure on my local amd64 - so >> this test might be a bit undetermined. Please confirm this and I'd be >> happy if you could send an *as simple as possible* patch or simply >> deactivate the patch. We are in deep freeze and need to find a quick >> and also simple solution. >> >> Kind regards >> >> Andreas. >> >> >> [1] https://buildd.debian.org/status/package.php?p=libbpp-phyl >> [2] >> https://buildd.debian.org/status/fetch.php?pkg=libbpp-phyl&arch=s390x&ver=2.4.1-2&stamp=1551477555&raw=0 >> >> -- >> http://fam-tille.de >> >> > > -- > Julien Y. Dutheil, Ph-D > 0 (+49) 6421 178 986 > > § Max Planck Institute for Evolutionary Biology > Molecular Systems Evolution > Department of Evolutionary Genetics > Plön -- GERMANY > > § Institute of Evolutionary Sciences - Montpellier > University of Montpellier 2 -- FRANCE > -- Julien Y. Dutheil, Ph-D 0 (+49) 4522 763 298 § Max Planck Institute for Evolutionary Biology Molecular Systems Evolution Department of Evolutionary Genetics Plön -- GERMANY § Institute of Evolutionary Sciences - Montpellier University of Montpellier 2 -- FRANCE
