I use ccp4 to create Fo-Fc or 2Fo-Fc omit maps, then read them into Pymol and display them with the isomesh command with an appropriate carve radius. That might pick up an unmodelled blob.
__________________ Roger Rowlett On Thu, Jul 18, 2024, 10:33 AM Andrea Smith <andrea.sm...@uochb.cas.cz> wrote: > Hi, > > > > I have a “green blob” in my map and I want to create a picture of it. What > is the best option to do this? > > > > Normally, to make figures of maps, I use pymol's "display ccp4 maps", but > pymol shows maps around “site”. So if I don't fit anything into my blob, I > can't create a “site” and display the map. > > > > Is printscreen from Coot my only option? > > > > Thank you for suggestions, > > Andrea > > ------------------------------ > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
