Dear Marco, > Refmac: Input coordinate file is not complete Probably the CRYST1 record (unit cell and space group information) is missing in your pdb file. You could copy this from another pdb file (and may need to correct it).
Best regards, Keitaro On Wed, 28 Feb 2024 at 09:54, Marco Bravo <mbrav...@ucr.edu> wrote: > > Hello all, > Does anyone know how to save a superimposed pymol or chimerax session as a > PDB file in correct format so that I can used it for ccp4 refmac? I am trying > to superimpose a protein with DNA bound onto the same protein from a > different species without the DNA. I just want the DNA from the protein-DNA > complex to be superimposed onto the apo protein structure. I have done the > superimposition and got rid of the protein from the original protein-DNA > complex and now have the DNA with the apo protein structure. When I try to > use this new PDB filer for refmac or even MR I get this error. Refmac: > Input coordinate file is not complete. Does anyone know how to properly do > this ? > > Thank you > > ######################################################################## > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > > This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing > list hosted by www.jiscmail.ac.uk, terms & conditions are available at > https://www.jiscmail.ac.uk/policyandsecurity/ ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
