Hello,
Keeping the waters in a model used for molecular replacement search is
not a very good idea.
I'd suggest first that you use a program like Chainsaw and possibly
additional programs to fine-tune your search model to the problem that
you are trying to solve.
Also, reading material such as the ccp4 study weekend proceedings
devoted to molecular replacement and similar material (that are
available on the internet) would be a good idea as well. The problems
you are encountering have been discussed in the literature.
Fred.
On 06/01/15 13:06, allen price wrote:
Dear all:
I got a dataset at 2.8 angstron. I have tried several ways such as
phaser, MRBUMP,BALBES,but still can't solve the
data,which means I have to edit my model. Maybe I'd better cut it off
or delete the water or loop. I really have no
idea,as it is my first time to do such things, I alway used the whole
model to mr. Could anyone give me some advice?
what kind of software do you guys use? really need you help!
Best regards,
Allen
--
Fred. Vellieux (B.Sc., Ph.D., hdr)
IBS / ELMA
Campus EPN
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