Hi Nitesh, That is confirmed for both me and Manthan (who was a computational science developer in my lab).
Cheers, Jesse On Thu, Sep 3, 2020 at 10:00 AM Stephan Fischer <stephisc...@gmail.com> wrote: > > Hi Jesse, Manthan, Nitesh, > > I wrote an e-mail earlier this week to Bioconductor support to take over > maintenance of the MetaNeighbor package. Nitesh nicely offered to help me > with the task, but would like to make sure that everyone agrees first. Can > you please briefly confirm the change by answering this email? > > Thanks everyone, > > Best, > > Stephan > > On 03/09/2020 15:45, Nitesh Turaga wrote: > > Hi Stephan, > > First, I’d like you to cc Dr. Jesse Gillis and also Manthan so we know that > everyone is in agreement. > > I can help you with the permissions on the Bioconductor repo. Before you get > permissions you will only be able to fetch using the HTTP protocol, i.e > > git remote set-url upstream https://git.bioconductor.org/packages/MetaNeighbor > > git fetch —all > > Once you get the permissions you can modify the remote to use the SSH > protocol instead. > > Best, > > Nitesh > > On Aug 31, 2020, at 3:49 AM, Stephan Fischer <stephisc...@gmail.com> wrote: > > Hi, > > My name is Stephan Fischer, I'm a postdoc at CSHL with Dr Jesse Gillis > and I'm currently maintaining the internal version of the MetaNeighbor > package. The Bioconductor version of the package was previously > maintained by Manthan Shah, who left the lab about a year ago. I would > like to take over the maintenance of the MetaNeighbor package on > Bioconductor and sync it with our internal version. Here is what I would > like to do: > > * Change of Github repository: Manthan hosted his own version of > MetaNeighbor on a personal Github to sync with Bioconductor. I would > rather use the Gillis lab Github instead. If I understand correctly, > this should not be too much of an issue, since the two repositories > have a shared history (Manthan forked the Gillis lab repo). > * Change of permission: I set the bioconductor URL upstream of the > Gillis lab repo, but when I try to fetch, I get a warning that I > don't have the right permissions. At a glance I could not find how > the permission system works. Would it be possible to update > permissions so that I (and maybe other lab members) can access the > Bioconductor repo? > > Thanks for your help! > > Best, > > Stephan > > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
