Hi Stephan,
First, I’d like you to cc Dr. Jesse Gillis and also Manthan so we know that
everyone is in agreement.
I can help you with the permissions on the Bioconductor repo. Before you get
permissions you will only be able to fetch using the HTTP protocol, i.e
git remote set-url upstream
https://git.bioconductor.org/packages/MetaNeighbor
<https://git.bioconductor.org/packages/MetaNeighbor>
git fetch —all
Once you get the permissions you can modify the remote to use the SSH protocol
instead.
Best,
Nitesh
> On Aug 31, 2020, at 3:49 AM, Stephan Fischer <stephisc...@gmail.com> wrote:
>
> Hi,
>
> My name is Stephan Fischer, I'm a postdoc at CSHL with Dr Jesse Gillis
> and I'm currently maintaining the internal version of the MetaNeighbor
> package. The Bioconductor version of the package was previously
> maintained by Manthan Shah, who left the lab about a year ago. I would
> like to take over the maintenance of the MetaNeighbor package on
> Bioconductor and sync it with our internal version. Here is what I would
> like to do:
>
> * Change of Github repository: Manthan hosted his own version of
> MetaNeighbor on a personal Github to sync with Bioconductor. I would
> rather use the Gillis lab Github instead. If I understand correctly,
> this should not be too much of an issue, since the two repositories
> have a shared history (Manthan forked the Gillis lab repo).
> * Change of permission: I set the bioconductor URL upstream of the
> Gillis lab repo, but when I try to fetch, I get a warning that I
> don't have the right permissions. At a glance I could not find how
> the permission system works. Would it be possible to update
> permissions so that I (and maybe other lab members) can access the
> Bioconductor repo?
>
> Thanks for your help!
>
> Best,
>
> Stephan
>
>
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>
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