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Posting to the mailing list allows other on Bioconductor to chime in when appropriate. Cheers, Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Oghabian, Ali <ali.oghab...@helsinki.fi> Sent: Thursday, February 8, 2018 1:31:59 PM To: Turaga, Nitesh; bioc-devel Subject: Re: [Bioc-devel] Updates not affected Hi again! Ok, from now on I'll send to the email list. git remote -v origin https://github.com/gacatag/IntEREst.git (fetch) origin https://github.com/gacatag/IntEREst.git (push) upstream g...@git.bioconductor.org:packages/IntEREst (fetch) upstream g...@git.bioconductor.org:packages/IntEREst (push) I made extensive changes to both devel and release. As an example I increased the z in the (x.y.z) version: The release version should be at 1.2.2 (not 1.2.0 !) (https://bioconductor.org/packages/release/bioc/html/IntEREst.html) The devel version should be at 1.3.2 (not 1.3.0 !) (https://www.bioconductor.org/packages/3.7/bioc/html/IntEREst.html<https://www.bioconductor.org/packages/3.7/bioc/html/IntEREst.html>) Cheers, Ali -- Ali Oghabian Bioinformatics, RNA-splicing laboratory (Room 4024B), Institute of Biotechnology, P.O.Box 56 (Viikinkaari 5), 00014 University of Helsinki Finland. Email: ali.oghab...@helsinki.fi<https://webmail.helsinki.fi/horde/imp/dynamic.php?page=mailbox#> Phone: +358 50 4484569 ________________________________ From: Turaga, Nitesh <nitesh.tur...@roswellpark.org> Sent: 08 February 2018 20:11:38 To: Oghabian, Ali; bioc-devel Subject: Re: Updates not affected Hi Ali, Please send all these queries to the bioc-devel mailing list. There are other people on the team/developer community who can help you with these questions in the event there is no response from us. I need more information to check the your package, git remote -v (so that I can see that your git repo is set up correctly) What commits are the ones you are expecting to see in the bioconductor git repo? We have started an RSS feed which is updated every 20 mins, https://stat.ethz.ch/pipermail/bioc-devel/2018-January/012577.html. Please follow that if you want to see if your changes are in effect. Best, Nitesh > On Feb 8, 2018, at 12:58 PM, Oghabian, Ali <ali.oghab...@helsinki.fi> wrote: > > Dear Nitesh Hello. > > Few hours ago I pushed several commits to the develop and release version of > our package IntEREst. It has not yet been affected though and the updates are > not shown in Bioconductor website. Could you kindly check the situation of > the updates? > > To update release version I ran: > git push origin RELEASE_3_6 > and > git push upstream RELEASE_3_6 > > To update develop version I ran: > git push origin > and > git push upstream > > The changes have already been affected in github. > > cheers, > > Ali > > -- > > Ali Oghabian > Bioinformatics, > > RNA-splicing laboratory (Room 4024B), > Institute of Biotechnology, > P.O.Box 56 (Viikinkaari 5), > 00014 University of Helsinki > Finland. > > Email: ali.oghab...@helsinki.fi > Phone: +358 50 4484569 This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
