Hi Marcin, Here is a link to how Bioconductor creates it's badges: https://github.com/Bioconductor/bioconductor.org/blob/master/Rakefile#L648
If you would like to create a badge for raw counts the following might be of use to you. Please also see help on XML Path Language: https://www.w3.org/TR/xpath/#path-abbrev library(xml2) url = "http://bioconductor.org/packages/stats/bioc/RTCGA.html"; doc = read_html(url) rtcga = xml_find_all(doc, "//table[@class='stats']/tr/td[2]/text()") %>% as.character %>% as.integer url2 = "http://bioconductor.org/packages/stats/index.html"; doc2 = read_html(url2) all = xml_find_all(doc2, "//table[@class='stats']/tr/td[2]/text()") %>% as.character %>% as.integer On Wed, May 4, 2016 at 3:43 PM, Marcin Kosiński <m.p.kosin...@gmail.com> wrote: > Hi Robert, > > Thanks for reply. > > What if I am interested in both showing raw counts and percentiles? > If this is not created and no one is willing to create sush shields, then I > can volounteer for that. > It'll be great to have some examples on how the percentile badges were > created. > > Best, > Marcin > > > 2016-05-04 17:22 GMT+02:00 Dan Tenenbaum <dtene...@fredhutch.org>: > >> That's correct. >> Dan >> >> >> ----- Original Message ----- >> > From: "Andrzej Oleś" <andrzej.o...@gmail.com> >> > To: "Robert M. Flight" <rfligh...@gmail.com> >> > Cc: "Marcin Kosiński" <m.p.kosin...@gmail.com>, "bioc-devel" < >> bioc-devel@r-project.org>, "Dan Tenenbaum" >> > <dtene...@fredhutch.org> >> > Sent: Wednesday, May 4, 2016 8:15:36 AM >> > Subject: Re: [Bioc-devel] downloads number status shields for packages >> >> > Hi Marcin, Robert, >> > >> > I think one problem with raw counts is that these reflect only downloads >> > from BioC servers and not from the mirrors - is that correct @Dan? >> > >> > Cheers, >> > Andrzej >> > >> > On Wed, May 4, 2016 at 5:11 PM, Robert M. Flight <rfligh...@gmail.com> >> > wrote: >> > >> >> Those numbers are used to calculate the percentile download stat that is >> >> already on a given bioconductor package landing page. See >> >> http://bioconductor.org/packages/release/bioc/html/RTCGA.html >> >> >> >> I believe this was the way the Bioc admins went instead of just raw >> >> downloads. >> >> >> >> -Robert >> >> >> >> On Wed, May 4, 2016 at 10:58 AM Marcin Kosiński <m.p.kosin...@gmail.com >> > >> >> wrote: >> >> >> >> > Hi all, >> >> > >> >> > Have anyone considered creating shields (http://shields.io/) with the >> >> > status of total downloads number for packages held on bioc? This >> already >> >> > works for CRAN packages http://cranlogs.r-pkg.org/ >> >> > >> >> > It could take total `Nb of downloads` from the right table like here >> >> > http://bioconductor.org/packages/stats/bioc/RTCGA.html >> >> > >> >> > Best, >> >> > Marcin >> >> > >> >> > [[alternative HTML version deleted]] >> >> > >> >> > _______________________________________________ >> >> > Bioc-devel@r-project.org mailing list >> >> > https://stat.ethz.ch/mailman/listinfo/bioc-devel >> >> > >> >> >> >> [[alternative HTML version deleted]] >> >> >> >> _______________________________________________ >> >> Bioc-devel@r-project.org mailing list >> >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
