Silvio Tschapke wrote:
I took a look at jython and actually I am trying to implement a java servlet
which calls a python module with help of jython.
But I am not sure how and if I can use Biopython inside my jython modules.

I do not know anything about jython (or python for that matter), but by browsing around I found this, which may give you a clue as to the solution :
http://wiki.python.org/jython/UserGuide#embedding-jython

Sounds like an interesting animal anyway..
If I understand that thing right, this is a just-in-time compiler that can compile Python programs and modules as Java bytecode, then run it as a servlet. Amazing what smart people can put together nowadays.

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