Hello, Installing glibc moved the installation little bit but again stuck at sanity check. Location of config.log: https://drive.google.com/drive/u/0/folders/0B6O-L5Y7BiGJfmQ4N2FpblBEcFNxaDZnaGpsUFFEUlotVWFjajR0UFFHNk5aYlhoSHVTWkU
$ cpp --version cpp (GCC) 4.8.5 20150623 (Red Hat 4.8.5-16) Copyright (C) 2015 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. I have gcc and gcc-c++ installed. On Tue, Apr 3, 2018 at 10:08 AM, Gilles Gouaillardet <gil...@rist.or.jp> wrote: > This is the relevant part related to this error > > configure:6620: checking whether we are cross compiling > configure:6628: gcc -o conftest conftest.c >&5 > conftest.c:10:19: fatal error: stdio.h: No such file or directory > #include <stdio.h> > ^ > compilation terminated. > configure:6632: $? = 1 > configure:6639: ./conftest > ../configure: line 6641: ./conftest: No such file or directory > configure:6643: $? = 127 > > > at the very least, you need to install the glibc-headers package > > > Cheers, > > > Gilles > > > On 4/3/2018 1:22 PM, abhisek Mondal wrote: > >> Hello, >> >> I have uploaded the config.log here: https://drive.google.com/drive >> /u/0/folders/0B6O-L5Y7BiGJfmQ4N2FpblBEcFNxaDZnaGpsUFFEUlotVW >> FjajR0UFFHNk5aYlhoSHVTWkU >> >> >> >> >> On Tue, Apr 3, 2018 at 9:47 AM, Gilles Gouaillardet <gil...@rist.or.jp >> <mailto:gil...@rist.or.jp>> wrote: >> >> Can you please compress and attach your config.log ? >> >> >> You might also want to double check you can compile *and* run a >> simple C hello world program >> >> >> Cheers, >> >> >> Gilles >> >> >> On 4/3/2018 1:06 PM, abhisek Mondal wrote: >> >> Hi, >> >> I need some help regarding compiling Openmpi-3.0. I have >> perfectly working C compiler, however, during configuration >> I'm keep getting this error: >> >> /=========================================================== >> =================/ >> /== Configuring Open MPI/ >> /=========================================================== >> =================/ >> / >> / >> /*** Startup tests/ >> /checking build system type... x86_64-unknown-linux-gnu/ >> /checking host system type... x86_64-unknown-linux-gnu/ >> /checking target system type... x86_64-unknown-linux-gnu/ >> /checking for gcc... gcc/ >> /checking whether the C compiler works... yes/ >> /checking for C compiler default output file name... a.out/ >> /checking for suffix of executables... / >> /*checking whether we are cross compiling... configure: error: >> in `/home/user/openmpi-2.0.4':*/ >> /configure: error: cannot run C compiled programs./ >> /If you meant to cross compile, use `--host'./ >> /See `config.log' for more details/ >> >> I do not know waht is cross compiling but how can I avoid this >> error ? >> Please help me out here. >> >> Thanks >> >> -- Abhisek Mondal >> /Senior Research Fellow >> / >> /Structural Biology and Bioinformatics Division >> / >> /CSIR-Indian Institute of Chemical Biology/ >> /Kolkata 700032 >> / >> /INDIA >> / >> >> >> _______________________________________________ >> users mailing list >> users@lists.open-mpi.org <mailto:users@lists.open-mpi.org> >> https://lists.open-mpi.org/mailman/listinfo/users >> <https://lists.open-mpi.org/mailman/listinfo/users> >> >> >> _______________________________________________ >> users mailing list >> users@lists.open-mpi.org <mailto:users@lists.open-mpi.org> >> https://lists.open-mpi.org/mailman/listinfo/users >> <https://lists.open-mpi.org/mailman/listinfo/users> >> >> >> >> >> -- >> Abhisek Mondal >> /Senior Research Fellow >> / >> /Structural Biology and Bioinformatics Division >> / >> /CSIR-Indian Institute of Chemical Biology/ >> /Kolkata 700032 >> / >> /INDIA >> / >> >> >> _______________________________________________ >> users mailing list >> users@lists.open-mpi.org >> https://lists.open-mpi.org/mailman/listinfo/users >> > > _______________________________________________ > users mailing list > users@lists.open-mpi.org > https://lists.open-mpi.org/mailman/listinfo/users > -- Abhisek Mondal *Senior Research Fellow* *Structural Biology and Bioinformatics Division* *CSIR-Indian Institute of Chemical Biology* *Kolkata 700032* *INDIA*
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