Hi Jeff, I looked for the 3.0.1 version but I only found the 3.0.0 version available for download. So I thought it may take a while for the 3.0.1 to become available. Or did I miss something?
Thanks, Vahid > On Jan 11, 2018, at 12:04 PM, Jeff Squyres (jsquyres) <jsquy...@cisco.com> > wrote: > > Vahid -- > > Were you able to give it a whirl? > > Thanks. > > >> On Jan 5, 2018, at 7:58 PM, Vahid Askarpour <vh261...@dal.ca> wrote: >> >> Gilles, >> >> I will try the 3.0.1rc1 version to see how it goes. >> >> Thanks, >> >> Vahid >> >>> On Jan 5, 2018, at 8:40 PM, Gilles Gouaillardet >>> <gilles.gouaillar...@gmail.com> wrote: >>> >>> Vahid, >>> >>> This looks like the description of the issue reported at >>> https://github.com/open-mpi/ompi/issues/4336 >>> The fix is currently available in 3.0.1rc1, and I will back port the fix fo >>> the v2.x branch. >>> A workaround is to use ROM-IO instead of ompio, you can achieve this with >>> mpirun —mca io ^ompio ... >>> (FWIW 1.10 series use ROM-IO by default, so there is no leak out of the box) >>> >>> IIRC, a possible (and ugly) workaround for the compilation issue is to >>> configure —with-ucx=/usr ... >>> That being said, you should really upgrade to a supported version of Open >>> MPI as previously suggested >>> >>> Cheers, >>> >>> Gilles >>> >>> On Saturday, January 6, 2018, Jeff Squyres (jsquyres) <jsquy...@cisco.com> >>> wrote: >>> You can still give Open MPI 2.1.1 a try. It should be source compatible >>> with EPW. Hopefully the behavior is close enough that it should work. >>> >>> If not, please encourage the EPW developers to upgrade. v3.0.x is the >>> current stable series; v1.10.x is ancient. >>> >>> >>> >>>> On Jan 5, 2018, at 5:22 PM, Vahid Askarpour <vh261...@dal.ca> wrote: >>>> >>>> Thank you Jeff for your suggestion to use the v.2.1 series. >>>> >>>> I am attempting to use openmpi with EPW. On the EPW website >>>> (http://epw.org.uk/Main/DownloadAndInstall), it is stated that: >>>> >>>>> Compatibility of EPW >>>>> >>>>> EPW is tested and should work on the following compilers and libraries: >>>>> >>>>> • gcc640 serial >>>>> • gcc640 + openmpi-1.10.7 >>>>> • intel 12 + openmpi-1.10.7 >>>>> • intel 17 + impi >>>>> • PGI 17 + mvapich2.3 >>>>> EPW is know to have the following incompatibilities with: >>>>> >>>>> • openmpi 2.0.2 (but likely on all the 2.x.x version): Works but >>>>> memory leak. If you open and close a file a lot of times with openmpi >>>>> 2.0.2, the memory increase linearly with the number of times the file is >>>>> open. >>>> >>>> So I am hoping to avoid the 2.x.x series and use the 1.10.7 version >>>> suggested by the EPW developers. However, it appears that this is not >>>> possible. >>>> >>>> Vahid >>>> >>>>> On Jan 5, 2018, at 5:06 PM, Jeff Squyres (jsquyres) <jsquy...@cisco.com> >>>>> wrote: >>>>> >>>>> I forget what the underlying issue was, but this issue just came up and >>>>> was recently fixed: >>>>> >>>>> https://github.com/open-mpi/ompi/issues/4345 >>>>> >>>>> However, the v1.10 series is fairly ancient -- the fix was not applied to >>>>> that series. The fix was applied to the v2.1.x series, and a snapshot >>>>> tarball containing the fix is available here (generally just take the >>>>> latest tarball): >>>>> >>>>> https://www.open-mpi.org/nightly/v2.x/ >>>>> >>>>> The fix is still pending for the v3.0.x and v3.1.x series (i.e., there >>>>> are pending pull requests that haven't been merged yet, so the nightly >>>>> snapshots for the v3.0.x and v3.1.x branches do not yet contain this fix). >>>>> >>>>> >>>>> >>>>>> On Jan 5, 2018, at 1:34 PM, Vahid Askarpour <vh261...@dal.ca> wrote: >>>>>> >>>>>> I am attempting to install openmpi-1.10.7 on CentOS Linux (7.4.1708) >>>>>> using GCC-6.4.0. >>>>>> >>>>>> When compiling, I get the following error: >>>>>> >>>>>> make[2]: Leaving directory >>>>>> '/home/vaskarpo/bin/openmpi-1.10.7/ompi/mca/pml/ob1' >>>>>> Making all in mca/pml/ucx >>>>>> make[2]: Entering directory >>>>>> '/home/vaskarpo/bin/openmpi-1.10.7/ompi/mca/pml/ucx' >>>>>> CC pml_ucx.lo >>>>>> CC pml_ucx_request.lo >>>>>> CC pml_ucx_datatype.lo >>>>>> CC pml_ucx_component.lo >>>>>> CCLD mca_pml_ucx.la >>>>>> libtool: error: require no space between '-L' and '-lrt' >>>>>> make[2]: *** [Makefile:1725: mca_pml_ucx.la] Error 1 >>>>>> make[2]: Leaving directory >>>>>> '/home/vaskarpo/bin/openmpi-1.10.7/ompi/mca/pml/ucx' >>>>>> make[1]: *** [Makefile:3261: all-recursive] Error 1 >>>>>> make[1]: Leaving directory '/home/vaskarpo/bin/openmpi-1.10.7/ompi' >>>>>> make: *** [Makefile:1777: all-recursive] Error 1 >>>>>> >>>>>> Thank you, >>>>>> >>>>>> Vahid >>>>>> _______________________________________________ >>>>>> users mailing list >>>>>> users@lists.open-mpi.org >>>>>> https://lists.open-mpi.org/mailman/listinfo/users >>>>> >>>>> >>>>> -- >>>>> Jeff Squyres >>>>> jsquy...@cisco.com >>>>> >>>>> >>>>> >>>>> _______________________________________________ >>>>> users mailing list >>>>> users@lists.open-mpi.org >>>>> https://lists.open-mpi.org/mailman/listinfo/users >>>> >>>> _______________________________________________ >>>> users mailing list >>>> users@lists.open-mpi.org >>>> https://lists.open-mpi.org/mailman/listinfo/users >>> >>> >>> -- >>> Jeff Squyres >>> jsquy...@cisco.com >>> >>> >>> >>> _______________________________________________ >>> users mailing list >>> users@lists.open-mpi.org >>> https://lists.open-mpi.org/mailman/listinfo/users >>> _______________________________________________ >>> users mailing list >>> users@lists.open-mpi.org >>> https://lists.open-mpi.org/mailman/listinfo/users >> >> _______________________________________________ >> users mailing list >> users@lists.open-mpi.org >> https://lists.open-mpi.org/mailman/listinfo/users > > > -- > Jeff Squyres > jsquy...@cisco.com > > > > _______________________________________________ > users mailing list > users@lists.open-mpi.org > https://lists.open-mpi.org/mailman/listinfo/users _______________________________________________ users mailing list users@lists.open-mpi.org https://lists.open-mpi.org/mailman/listinfo/users
