Siegmar, these are just warnings, you can safely ignore them
Cheers, Gilles On Tuesday, June 16, 2015, Siegmar Gross < siegmar.gr...@informatik.hs-fulda.de> wrote: > Hi, > > today I tried to build openmpi-dev-1883-g7cce015 on my machines > (Solaris 10 Sparc, Solaris 10 x86_64, and openSUSE Linux 12.1 > x86_64) with gcc-5.1.0 and Sun C 5.13/5.12. I got the following > error for gcc-5.1.0 and Sun C 5.12 on Linux and I didn't get any > errors on my Solaris machines for gcc-5.1.0 and Sun C 5.13. > I used the following command to configure the package for gcc. > > ../openmpi-dev-1883-g7cce015/configure > --prefix=/usr/local/openmpi-master_64_gcc \ > --libdir=/usr/local/openmpi-master_64_gcc/lib64 \ > --with-jdk-bindir=/usr/local/jdk1.8.0/bin \ > --with-jdk-headers=/usr/local/jdk1.8.0/include \ > JAVA_HOME=/usr/local/jdk1.8.0 \ > LDFLAGS="-m64" CC="gcc" CXX="g++" FC="gfortran" \ > CFLAGS="-m64" CXXFLAGS="-m64" FCFLAGS="-m64" \ > CPP="cpp" CXXCPP="cpp" \ > CPPFLAGS="" CXXCPPFLAGS="" \ > --enable-mpi-cxx \ > --enable-cxx-exceptions \ > --enable-mpi-java \ > --enable-heterogeneous \ > --enable-mpi-thread-multiple \ > --with-hwloc=internal \ > --without-verbs \ > --with-wrapper-cflags="-std=c11 -m64" \ > --with-wrapper-cxxflags="-m64" \ > --with-wrapper-fcflags="-m64" \ > --enable-debug \ > |& tee log.configure.$SYSTEM_ENV.$MACHINE_ENV.64_gcc > > > ... > make install-exec-hook > make[3]: Entering directory > `/export2/src/openmpi-master/openmpi-dev-1883-g7cce015-Linux.x86_64.64_gcc' > WARNING! Common symbols found: > keyval_lex.o: 0000000000000004 C opal_util_keyval_yyleng > keyval_lex.o: 0000000000000008 C opal_util_keyval_yytext > show_help_lex.o: 0000000000000004 C opal_show_help_yyleng > show_help_lex.o: 0000000000000008 C opal_show_help_yytext > rmaps_rank_file_lex.o: 0000000000000004 C orte_rmaps_rank_file_leng > rmaps_rank_file_lex.o: 0000000000000008 C orte_rmaps_rank_file_text > hostfile_lex.o: 0000000000000004 C orte_util_hostfile_leng > hostfile_lex.o: 0000000000000008 C orte_util_hostfile_text > mpi-f08-types.o: 0000000000000004 C mpi_fortran_argv_null > mpi-f08-types.o: 0000000000000004 C mpi_fortran_argvs_null > [...] > skipping remaining symbols. To see all symbols, run: > ../openmpi-dev-1883-g7cce015/config/find_common_syms --top_builddir=. > --top_srcdir=../openmpi-dev-1883-g7cce015 --objext=o > make[3]: [install-exec-hook] Error 1 (ignored) > make[3]: Leaving directory > `/export2/src/openmpi-master/openmpi-dev-1883-g7cce015-Linux.x86_64.64_gcc' > make[2]: Nothing to be done for `install-data-am'. > make[2]: Leaving directory > `/export2/src/openmpi-master/openmpi-dev-1883-g7cce015-Linux.x86_64.64_gcc' > make[1]: Leaving directory > `/export2/src/openmpi-master/openmpi-dev-1883-g7cce015-Linux.x86_64.64_gcc' > linpc1 openmpi-dev-1883-g7cce015-Linux.x86_64.64_gcc 130 > > > > linpc1 openmpi-dev-1883-g7cce015-Linux.x86_64.64_gcc 130 > ../openmpi-dev-1883-g7cce015/config/find_common_syms --top_builddir=. > --top_srcdir=../openmpi-dev-1883-g7cce015 --objext=o > WARNING! Common symbols found: > keyval_lex.o: 0000000000000004 C opal_util_keyval_yyleng > keyval_lex.o: 0000000000000008 C opal_util_keyval_yytext > show_help_lex.o: 0000000000000004 C opal_show_help_yyleng > show_help_lex.o: 0000000000000008 C opal_show_help_yytext > rmaps_rank_file_lex.o: 0000000000000004 C orte_rmaps_rank_file_leng > rmaps_rank_file_lex.o: 0000000000000008 C orte_rmaps_rank_file_text > hostfile_lex.o: 0000000000000004 C orte_util_hostfile_leng > hostfile_lex.o: 0000000000000008 C orte_util_hostfile_text > mpi-f08-types.o: 0000000000000004 C mpi_fortran_argv_null > mpi-f08-types.o: 0000000000000004 C mpi_fortran_argvs_null > mpi-f08-types.o: 0000000000000004 C mpi_fortran_bottom > mpi-f08-types.o: 0000000000000004 C mpi_fortran_errcodes_ignore > mpi-f08-types.o: 0000000000000004 C mpi_fortran_in_place > mpi-f08-types.o: 0000000000000018 C mpi_fortran_status_ignore > mpi-f08-types.o: 0000000000000018 C mpi_fortran_statuses_ignore > mpi-f08-types.o: 0000000000000004 C mpi_fortran_unweighted > mpi-f08-types.o: 0000000000000004 C mpi_fortran_weights_empty > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_2complex > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_2double_complex > mpi-f08-types.o: 0000000000000004 C > ompi_f08_mpi_2double_precision > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_2integer > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_2real > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_band > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_bor > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_bxor > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_byte > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_character > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_comm_null > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_comm_self > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_comm_world > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_complex > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_complex16 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_complex32 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_complex8 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_datatype_null > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_double_complex > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_double_precision > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_errhandler_null > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_errors_are_fatal > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_errors_return > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_file_null > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_group_empty > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_group_null > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_info_env > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_info_null > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_integer > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_integer1 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_integer16 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_integer2 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_integer4 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_integer8 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_land > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_lb > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_logical > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_logical1 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_logical2 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_logical4 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_logical8 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_lor > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_lxor > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_max > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_maxloc > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_message_no_proc > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_message_null > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_min > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_minloc > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_op_null > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_packed > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_prod > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_real > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_real16 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_real2 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_real4 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_real8 > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_replace > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_request_null > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_sum > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_ub > mpi-f08-types.o: 0000000000000004 C ompi_f08_mpi_win_null > shmem_ShMem.o: 0000000000000010 C shmem_java > shmem_ShMem.o: 00000000000001f8 C shmem_java_buffers > linpc1 openmpi-dev-1883-g7cce015-Linux.x86_64.64_gcc 131 > > > > > ... > make install-exec-hook > make[3]: Entering directory > `/export2/src/openmpi-master/openmpi-dev-1883-g7cce015-Linux.x86_64.64_cc' > WARNING! Common symbols found: > keyval_lex.o: 0000000000000004 C opal_util_keyval_yyleng > keyval_lex.o: 0000000000000008 C opal_util_keyval_yytext > show_help_lex.o: 0000000000000004 C opal_show_help_yyleng > show_help_lex.o: 0000000000000008 C opal_show_help_yytext > rmaps_rank_file_lex.o: 0000000000000004 C orte_rmaps_rank_file_leng > rmaps_rank_file_lex.o: 0000000000000008 C orte_rmaps_rank_file_text > hostfile_lex.o: 0000000000000004 C orte_util_hostfile_leng > hostfile_lex.o: 0000000000000008 C orte_util_hostfile_text > shmem_ShMem.o: 0000000000000010 C shmem_java > shmem_ShMem.o: 00000000000001f8 C shmem_java_buffers > make[3]: [install-exec-hook] Error 1 (ignored) > make[3]: Leaving directory > `/export2/src/openmpi-master/openmpi-dev-1883-g7cce015-Linux.x86_64.64_cc' > make[2]: Nothing to be done for `install-data-am'. > make[2]: Leaving directory > `/export2/src/openmpi-master/openmpi-dev-1883-g7cce015-Linux.x86_64.64_cc' > make[1]: Leaving directory > `/export2/src/openmpi-master/openmpi-dev-1883-g7cce015-Linux.x86_64.64_cc' > linpc1 openmpi-dev-1883-g7cce015-Linux.x86_64.64_cc 130 > > > linpc1 openmpi-dev-1883-g7cce015-Linux.x86_64.64_cc 130 > ../openmpi-dev-1883-g7cce015/config/find_common_syms --top_builddir=. > --top_srcdir=../openmpi-dev-1883-g7cce015 --objext=o > WARNING! Common symbols found: > keyval_lex.o: 0000000000000004 C opal_util_keyval_yyleng > keyval_lex.o: 0000000000000008 C opal_util_keyval_yytext > show_help_lex.o: 0000000000000004 C opal_show_help_yyleng > show_help_lex.o: 0000000000000008 C opal_show_help_yytext > rmaps_rank_file_lex.o: 0000000000000004 C orte_rmaps_rank_file_leng > rmaps_rank_file_lex.o: 0000000000000008 C orte_rmaps_rank_file_text > hostfile_lex.o: 0000000000000004 C orte_util_hostfile_leng > hostfile_lex.o: 0000000000000008 C orte_util_hostfile_text > shmem_ShMem.o: 0000000000000010 C shmem_java > shmem_ShMem.o: 00000000000001f8 C shmem_java_buffers > linpc1 openmpi-dev-1883-g7cce015-Linux.x86_64.64_cc 131 > > > > Kind regards > > Siegmar > > > _______________________________________________ > users mailing list > us...@open-mpi.org <javascript:;> > Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users > Link to this post: > http://www.open-mpi.org/community/lists/users/2015/06/27136.php >
