Hi, I just use --disable-mpif77 and --disable-mpif90 to let configure run well. However, I know it's only tough workround. After configured well, I encounter following error when run make:
Making all in config make[1]: Entering directory `/home/huli/Projects/openmpi-1.6.3/config' make[1]: Nothing to be done for `all'. make[1]: Leaving directory `/home/huli/Projects/openmpi-1.6.3/config' Making all in contrib make[1]: Entering directory `/home/huli/Projects/openmpi-1.6.3/contrib' make[1]: Nothing to be done for `all'. make[1]: Leaving directory `/home/huli/Projects/openmpi-1.6.3/contrib' Making all in opal make[1]: Entering directory `/home/huli/Projects/openmpi-1.6.3/opal' Making all in include make[2]: Entering directory `/home/huli/Projects/openmpi-1.6.3/opal/include' make all-am make[3]: Entering directory `/home/huli/Projects/openmpi-1.6.3/opal/include' make[3]: Leaving directory `/home/huli/Projects/openmpi-1.6.3/opal/include' make[2]: Leaving directory `/home/huli/Projects/openmpi-1.6.3/opal/include' Making all in libltdl make[2]: Entering directory `/home/huli/Projects/openmpi-1.6.3/opal/libltdl' make all-am make[3]: Entering directory `/home/huli/Projects/openmpi-1.6.3/opal/libltdl' /bin/sh ./libtool --tag=CC --mode=compile armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='<config.h>' -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT dlopen.lo -MD -MP -MF .deps/dlopen.Tpo -c -o dlopen.lo `test -f 'loaders/dlopen.c' || echo './'`loaders/dlopen.c /bin/sh ./libtool --tag=CC --mode=compile armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='<config.h>' -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT libltdlc_la-preopen.lo -MD -MP -MF .deps/libltdlc_la-preopen.Tpo -c -o libltdlc_la-preopen.lo `test -f 'loaders/preopen.c' || echo './'`loaders/preopen.c /bin/sh ./libtool --tag=CC --mode=compile armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='<config.h>' -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c -o libltdlc_la-lt__alloc.lo `test -f 'lt__alloc.c' || echo './'`lt__alloc.c /bin/sh ./libtool --tag=CC --mode=compile armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='<config.h>' -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c -o libltdlc_la-lt_dlloader.lo `test -f 'lt_dlloader.c' || echo './'`lt_dlloader.c /bin/sh ./libtool --tag=CC --mode=compile armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='<config.h>' -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c -o libltdlc_la-lt_error.lo `test -f 'lt_error.c' || echo './'`lt_error.c /bin/sh ./libtool --tag=CC --mode=compile armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='<config.h>' -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c -o libltdlc_la-ltdl.lo `test -f 'ltdl.c' || echo './'`ltdl.c /bin/sh ./libtool --tag=CC --mode=compile armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc -DLT_CONFIG_H='<config.h>' -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c -o libltdlc_la-slist.lo `test -f 'slist.c' || echo './'`slist.c /bin/sh ./libtool --tag=CC --mode=compile armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -DLT_CONFIG_H='<config.h>' -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT lt__strl.lo -MD -MP -MF .deps/lt__strl.Tpo -c -o lt__strl.lo lt__strl.c libtool: compile: armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=<config.h>" -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT libltdlc_la-lt__alloc.lo -MD -MP -MF .deps/libltdlc_la-lt__alloc.Tpo -c lt__alloc.c -fPIC -DPIC -o .libs/libltdlc_la-lt__alloc.o libtool: compile: armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=<config.h>" -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT libltdlc_la-preopen.lo -MD -MP -MF .deps/libltdlc_la-preopen.Tpo -c loaders/preopen.c -fPIC -DPIC -o .libs/libltdlc_la-preopen.o libtool: compile: armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=<config.h>" -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT libltdlc_la-lt_error.lo -MD -MP -MF .deps/libltdlc_la-lt_error.Tpo -c lt_error.c -fPIC -DPIC -o .libs/libltdlc_la-lt_error.o libtool: compile: armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=<config.h>" -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT lt__strl.lo -MD -MP -MF .deps/lt__strl.Tpo -c lt__strl.c -fPIC -DPIC -o .libs/lt__strl.o libtool: compile: armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. "-DLT_CONFIG_H=<config.h>" -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT dlopen.lo -MD -MP -MF .deps/dlopen.Tpo -c loaders/dlopen.c -fPIC -DPIC -o .libs/dlopen.o libtool: compile: armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=<config.h>" -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT libltdlc_la-lt_dlloader.lo -MD -MP -MF .deps/libltdlc_la-lt_dlloader.Tpo -c lt_dlloader.c -fPIC -DPIC -o .libs/libltdlc_la-lt_dlloader.o libtool: compile: armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=<config.h>" -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT libltdlc_la-ltdl.lo -MD -MP -MF .deps/libltdlc_la-ltdl.Tpo -c ltdl.c -fPIC -DPIC -o .libs/libltdlc_la-ltdl.o libtool: compile: armv6-rpi-linux-gnueabi-gcc -DHAVE_CONFIG_H -I. -DLTDLOPEN=libltdlc "-DLT_CONFIG_H=<config.h>" -DLTDL -I. -I. -Ilibltdl -I./libltdl -I./libltdl -I/home/huli/Projects/openmpi-1.6.3/opal/mca/hwloc/hwloc132/hwloc/include -I/usr/include/infiniband -I/usr/include/infiniband -Ofast -mfpu=vfp -mfloat-abi=hard -MT libltdlc_la-slist.lo -MD -MP -MF .deps/libltdlc_la-slist.Tpo -c slist.c -fPIC -DPIC -o .libs/libltdlc_la-slist.o mv -f .deps/dlopen.Tpo .deps/dlopen.Plo /bin/sh ./libtool --tag=CC --mode=link armv6-rpi-linux-gnueabi-gcc -Ofast -mfpu=vfp -mfloat-abi=hard -module -avoid-version -o dlopen.la dlopen.lo -ldl -ldl -lrt -lnsl -lutil -lm mv -f .deps/libltdlc_la-lt__alloc.Tpo .deps/libltdlc_la-lt__alloc.Plo mv -f .deps/lt__strl.Tpo .deps/lt__strl.Plo mv -f .deps/libltdlc_la-lt_error.Tpo .deps/libltdlc_la-lt_error.Plo mv -f .deps/libltdlc_la-preopen.Tpo .deps/libltdlc_la-preopen.Plo mv -f .deps/libltdlc_la-lt_dlloader.Tpo .deps/libltdlc_la-lt_dlloader.Plo libtool: link: armv6-rpi-linux-gnueabi-ar cru .libs/dlopen.a .libs/dlopen.o libtool: link: armv6-rpi-linux-gnueabi-ranlib .libs/dlopen.a mv -f .deps/libltdlc_la-slist.Tpo .deps/libltdlc_la-slist.Plo libtool: link: ( cd ".libs" && rm -f "dlopen.la" && ln -s "../dlopen.la" "dlopen.la" ) mv -f .deps/libltdlc_la-ltdl.Tpo .deps/libltdlc_la-ltdl.Plo /bin/sh ./libtool --tag=CC --mode=link armv6-rpi-linux-gnueabi-gcc -Ofast -mfpu=vfp -mfloat-abi=hard -no-undefined -dlpreopen dlopen.la -o libltdlc.la libltdlc_la-preopen.lo libltdlc_la-lt__alloc.lo libltdlc_la-lt_dlloader.lo libltdlc_la-lt_error.lo libltdlc_la-ltdl.lo libltdlc_la-slist.lo lt__strl.lo -ldl -lrt -lnsl -lutil -lm libtool: link: rm -f .libs/libltdlc.nm .libs/libltdlc.nmS .libs/libltdlc.nmT libtool: link: (cd .libs && armv6-rpi-linux-gnueabi-gcc -Ofast -mfpu=vfp -mfloat-abi=hard -c -fno-builtin -fPIC -DPIC "libltdlcS.c") libtool: link: rm -f ".libs/libltdlcS.c" ".libs/libltdlc.nm" ".libs/libltdlc.nmS" ".libs/libltdlc.nmT" libtool: link: (cd .libs/libltdlc.lax/dlopen.a && armv6-rpi-linux-gnueabi-ar x "/home/huli/Projects/openmpi-1.6.3/opal/libltdl/./.libs/dlopen.a") libtool: link: armv6-rpi-linux-gnueabi-ar cru .libs/libltdlc.a .libs/libltdlc_la-preopen.o .libs/libltdlc_la-lt__alloc.o .libs/libltdlc_la-lt_dlloader.o .libs/libltdlc_la-lt_error.o .libs/libltdlc_la-ltdl.o .libs/libltdlc_la-slist.o .libs/lt__strl.o .libs/libltdlcS.o .libs/libltdlc.lax/dlopen.a/dlopen.o libtool: link: armv6-rpi-linux-gnueabi-ranlib .libs/libltdlc.a libtool: link: rm -fr .libs/libltdlc.lax libtool: link: ( cd ".libs" && rm -f "libltdlc.la" && ln -s "../libltdlc.la" "libltdlc.la" ) make[3]: Leaving directory `/home/huli/Projects/openmpi-1.6.3/opal/libltdl' make[2]: Leaving directory `/home/huli/Projects/openmpi-1.6.3/opal/libltdl' Making all in asm make[2]: Entering directory `/home/huli/Projects/openmpi-1.6.3/opal/asm' rm -f atomic-asm.S CC asm.lo ln -s "../../opal/asm/generated/atomic-local.s" atomic-asm.S CPPAS atomic-asm.lo atomic-asm.S: Assembler messages: atomic-asm.S:7: Error: selected processor does not support ARM mode `dmb' atomic-asm.S:15: Error: selected processor does not support ARM mode `dmb' atomic-asm.S:23: Error: selected processor does not support ARM mode `dmb' atomic-asm.S:55: Error: selected processor does not support ARM mode `dmb' atomic-asm.S:70: Error: selected processor does not support ARM mode `dmb' make[2]: *** [atomic-asm.lo] Error 1 make[2]: *** Waiting for unfinished jobs.... make[2]: Leaving directory `/home/huli/Projects/openmpi-1.6.3/opal/asm' make[1]: *** [all-recursive] Error 1 make[1]: Leaving directory `/home/huli/Projects/openmpi-1.6.3/opal' make: *** [all-recursive] Error 1 Here's my toolchain's gcc details. [huli@localhost openmpi-1.6.3]$ armv6-rpi-linux-gnueabi-gcc -v Using built-in specs. COLLECT_GCC=armv6-rpi-linux-gnueabi-gcc COLLECT_LTO_WRAPPER=/home/huli/Projects/arm-devel-rpi/libexec/gcc/arm-rpi-linux-gnueabi/4.7.3/lto-wrapper Target: arm-rpi-linux-gnueabi Configured with: /home/huli/Projects/ct-rpi/.build/src/gcc-linaro-4.7-2012.10/configure --build=x86_64-build_unknown-linux-gnu --host=x86_64-build_unknown-linux-gnu --target=arm-rpi-linux-gnueabi --prefix=/home/huli/Projects/arm-devel-rpi --with-sysroot=/home/huli/Projects/arm-devel-rpi/arm-rpi-linux-gnueabi/sysroot --enable-languages=c,c++,fortran --with-arch=armv6zk --with-cpu=arm1176jzf-s --with-tune=arm1176jzf-s --with-fpu=vfp --with-float=hard --with-pkgversion='crosstool-NG 1.17.0' --enable-__cxa_atexit --disable-libmudflap --disable-libgomp --disable-libssp --disable-libquadmath --disable-libquadmath-support --with-gmp=/home/huli/Projects/ct-rpi/.build/arm-rpi-linux-gnueabi/buildtools --with-mpfr=/home/huli/Projects/ct-rpi/.build/arm-rpi-linux-gnueabi/buildtools --with-mpc=/home/huli/Projects/ct-rpi/.build/arm-rpi-linux-gnueabi/buildtools --with-ppl=/home/huli/Projects/ct-rpi/.build/arm-rpi-linux-gnueabi/buildtools --with-cloog=/home/huli/Projects/ct-rpi/.build/arm-rpi-linux-gnueabi/buildtools --with-libelf=/home/huli/Projects/ct-rpi/.build/arm-rpi-linux-gnueabi/buildtools --with-host-libstdcxx='-static-libgcc -Wl,-Bstatic,-lstdc++,-Bdynamic -lm -L/home/huli/Projects/ct-rpi/.build/arm-rpi-linux-gnueabi/buildtools/lib -lpwl' --enable-threads=posix --enable-target-optspace --disable-nls --disable-multilib --with-local-prefix=/home/huli/Projects/arm-devel-rpi/arm-rpi-linux-gnueabi/sysroot --enable-c99 --enable-long-long --with-float=hard Thread model: posix gcc version 4.7.3 20121001 (prerelease) (crosstool-NG 1.17.0) Anyone have idea? Thanks. Eric On Sun, Jan 20, 2013 at 2:05 AM, Lee Eric <openlinuxsou...@gmail.com> wrote: > Hi, > > The cross-compile issue I fixed. Check following source code: > opal_config_asm.m4:897: [AC_MSG_ERROR([No atomic primitives available > for $host])]) > > It seems that checks the toolchain's tuple is one of: armv7* or armv6* > or armv5*. I have recompiled my toolchain and no such error occurred. > However, I hit another issue about fortran as configure running. > > *** Fortran 90/95 compiler > checking for armv6-rpi-linux-gnueabi-gfortran... > armv6-rpi-linux-gnueabi-gfortran > checking whether we are using the GNU Fortran compiler... yes > checking whether armv6-rpi-linux-gnueabi-gfortran accepts -g... yes > checking if Fortran 77 compiler works... links (cross compiling) > checking armv6-rpi-linux-gnueabi-gfortran external symbol > convention... single underscore > checking if C and Fortran 77 are link compatible... yes > checking to see if F77 compiler likes the C++ exception flags... > skipped (no C++ exceptions flags) > checking to see if mpif77/mpif90 compilers need additional linker flags... > none > checking if Fortran 77 compiler supports CHARACTER... yes > checking size of Fortran 77 CHARACTER... configure: error: Can not > determine size of CHARACTER when cross-compiling > > Any hint? Thanks. > > Eric > > On Sat, Jan 19, 2013 at 10:08 PM, Lee Eric <openlinuxsou...@gmail.com> wrote: >> Any heads up? Thanks. >> >> On Fri, Jan 18, 2013 at 5:28 AM, Jeff Squyres (jsquyres) >> <jsquy...@cisco.com> wrote: >>> On Jan 16, 2013, at 6:41 AM, Leif Lindholm <leif.lindh...@arm.com> wrote: >>> >>>> That isn't, technically speaking, correct for the Raspberry Pi - but it is >>>> a workaround if you know you will never actually use the asm >>>> implementations of the atomics, but only the inline C ones.. >>>> >>>> This sort of hides the problem that the dedicated barrier instructions >>>> were not available in ARMv6 (it used "system control coprocessor >>>> operations" instead. >>>> >>>> If you ever executed the asm implementation, you would trigger an >>>> undefined instruction exception on the Pi. >>> >>> Hah; sweet. Ok. >>> >>> So what's the right answer? Would it be acceptable to use a no-op for this >>> operation on such architectures? >>> >>> -- >>> Jeff Squyres >>> jsquy...@cisco.com >>> For corporate legal information go to: >>> http://www.cisco.com/web/about/doing_business/legal/cri/ >>> >>> >>> _______________________________________________ >>> users mailing list >>> us...@open-mpi.org >>> http://www.open-mpi.org/mailman/listinfo.cgi/users
