If you are building from a tarball, you don't need nor want to run autogen. All you want to do is run ./configure.
If you attempt to run autogen, you'll have to install all the required tools - including an appropriate libtool. Unless you are adding a component to OMPI, you're better off not doing so. On Jan 3, 2013, at 7:19 PM, Edge Edge <edge_din...@yahoo.com> wrote: > Hi, > > When I issue the following command as shown in the info listed > (http://www.open-mpi.org/community/help/): > [home@edge openmpi-1.6.3]$mpirun --bynode --hostfile my_hostfile.txt > --tag-output ompi_info -v ompi full --parsable > [home@edge openmpi-1.6.3]$ > -------------------------------------------------------------------------- > It looks like opal_init failed for some reason; your parallel process is > likely to abort. There are many reasons that a parallel process can > fail during opal_init; some of which are due to configuration or > environment problems. This failure appears to be an internal failure; > here's some additional information (which may only be relevant to an > Open MPI developer): > > opal_shmem_base_select failed > --> Returned value -1 instead of OPAL_SUCCESS > -------------------------------------------------------------------------- > [home@edge:77658] [[INVALID],INVALID] ORTE_ERROR_LOG: Error in file > runtime/orte_init.c at line 79 > [home@edge:77658] [[INVALID],INVALID] ORTE_ERROR_LOG: Error in file orterun.c > at line 694 > > I was downloading "openmpi-1.6.3". > If I issue the following command in order to install openmpi-1.6.3. > It gives me the following log info after I issue, ./autogen.sh > log file: > *** Running GNU tools > [Running] autom4te --language=m4sh ompi_get_version.m4sh -o > ompi_get_version.sh > [Running] libtoolize --automake --copy --ltdl > > ------------------------------------------------------------------------- > It seems that the execution of "libtoolize --automake --copy --ltdl" has > failed. See above for > the specific error message that caused it to abort. > ------------------------------------------------------------------------- > > error log file: > configure.in:2125: installing `confdb/config.guess' > configure.in:2125: installing `confdb/config.sub' > configure.in:210: installing `confdb/install-sh' > configure.in:210: installing `confdb/missing' > adio/ad_bgl/Makefile.am: installing `confdb/depcomp' > configure.in:96: installing `config/compile' > configure.in:34: installing `config/config.guess' > configure.in:34: installing `config/config.sub' > configure.in:8: installing `config/install-sh' > configure.in:8: installing `config/missing' > rfg/Makefile.am: installing `config/depcomp' > configure.in:10: installing `config/config.guess' > configure.in:10: installing `config/config.sub' > configure.in:11: installing `config/install-sh' > configure.in:11: installing `config/missing' > otfauxlib/Makefile.am: installing `config/depcomp' > libtoolize: `COPYING.LIB' not found in `/usr/share/libtool/libltdl' > > Thanks and looking forward to hear from you. > > best regards > Edge > > From: Jeff Squyres (jsquyres) <jsquy...@cisco.com> > To: Open MPI Users <us...@open-mpi.org> > Cc: Edge Edge <edge_din...@yahoo.com> > Sent: Sunday, December 30, 2012 2:07 AM > Subject: Re: [OMPI users] Open-mpi running issue and bug > > Please sent all the info listed here: > > http://www.open-mpi.org/community/help/ > > > On Dec 28, 2012, at 11:42 AM, Ralph Castain <r...@open-mpi.org> > wrote: > > > What version of OMPI are you using? How was it configured? > > > > > > On Dec 28, 2012, at 2:16 AM, Edge Edge <edge_din...@yahoo.com> wrote: > > > >> Hi, > >> > >> Currently I was trying to run mpirun to improve the performance of my > >> running. > >> However it keeps on showing the following bug: > >> > >> -------------------------------------------------------------------------- > >> It looks like opal_init failed for some reason; your parallel process is > >> likely to abort. There are many reasons that a parallel process can > >> fail during opal_init; some of which are due to configuration or > >> environment problems. This failure appears to be an internal failure; > >> here's some additional information (which may only be relevant to an > >> Open MPI developer): > >> > >> opal_shmem_base_select failed > >> --> Returned value -1 instead of OPAL_SUCCESS > >> -------------------------------------------------------------------------- > >> [home:07059] [[INVALID],INVALID] ORTE_ERROR_LOG: Error in file > >> runtime/orte_init.c at line 79 > >> [home:07059] [[INVALID],INVALID] ORTE_ERROR_LOG: Error in file orterun.c > >> at line 694 > >> make: *** [sample-1.fa] Error 255 > >> > >> Can I know how to solve this bug? > >> I got try to google around but I still fail to find related answer. > >> > >> Below is the spec of my server: > >> Linux home 2.6.32-71.el6.x86_64 #1 SMP Wed Sep 1 01:33:01 EDT 2010 x86_64 > >> x86_64 x86_64 GNU/Linux > >> > >> Hope it is useful for you in order to solve the bug. > >> > >> Thanks. > >> > >> > >> best regards > >> Edge > >> > >> > >> _______________________________________________ > >> users mailing list > >> us...@open-mpi.org > >> http://www.open-mpi.org/mailman/listinfo.cgi/users > > > > _______________________________________________ > > users mailing list > > us...@open-mpi.org > > http://www.open-mpi.org/mailman/listinfo.cgi/users > > > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users
