On Tue, 13 Mar 2012 at 6:05pm, Ralph Castain wrote
I started playing with this configure line on my Centos6 machine, and
I'd suggest a couple of things:
1. drop the --with-libltdl=external ==> not a good idea
2. drop --with-esmtp ==> useless unless you really want pager messages
notifying you of problems
3. drop --enable-mpi-threads for now
I'm continuing to play with it, but thought I'd pass those along.
After my first custom build of 1.4.5 didn't work, I built it again using
an utterly minimal configure line:
./configure --prefix=$HOME/ompi-1.4.5 --with-sge
Runs with this library still failed, but the backtrace did change
slightly:
#0 0x00002b7bbc8681d0 in ?? ()
#1 <signal handler called>
#2 0x00002b7bbd2b8f6c in mca_btl_sm_component_progress ()
from /netapp/sali/jlb/ompi-1.4.5/lib/openmpi/mca_btl_sm.so
#3 0x00002b7bb9b2feda in opal_progress ()
from /netapp/sali/jlb/ompi-1.4.5/lib/libopen-pal.so.0
#4 0x00002b7bba9a98d5 in barrier ()
from /netapp/sali/jlb/ompi-1.4.5/lib/openmpi/mca_grpcomm_bad.so
#5 0x00002b7bb965d426 in ompi_mpi_init ()
from /netapp/sali/jlb/ompi-1.4.5/lib/libmpi.so.0
#6 0x00002b7bb967cba0 in PMPI_Init ()
from /netapp/sali/jlb/ompi-1.4.5/lib/libmpi.so.0
#7 0x0000000000400826 in main (argc=1, argv=0x7fff93634788)
at mpihello-long.c:11
--
Joshua Baker-LePain
QB3 Shared Cluster Sysadmin
UCSF
