On Tue, 13 Mar 2012 at 5:06pm, Ralph Castain wrote
Out of curiosity: could you send along the mpirun cmd line you are using to launch these jobs? I'm wondering if the SGE integration itself is the problem, and it only shows up in the sm code.
It's about as simple as it gets: mpirun -np $NSLOTS $HOME/mybin/mpihello-long.ompi-1.4-debugwhere $NSLOTS is set by SGE based on how many slots in the PE one requests.
-- Joshua Baker-LePain QB3 Shared Cluster Sysadmin UCSF
