Just out of curiosity, does Open MPI 1.5.4 build properly?
We've seen problems with the PGI compiler suite before -- it *does* look like a
problem with libtool-building issues; e.g., a switch is too old or is missing
or something. Meaning: it looks like PGI thinks it's trying to build an
application, not a library. This is usually bit rot in libtool (i.e., PGI may
have changed their options, but we're using an older Libtool in the 1.4.x
series that doesn't know about this option).
I do note that we fixed some libtool issues in the 1.4.4 tarball; could you try
the 1.4.4rc and see if that fixes the issue? If not, we might have missed some
patches to bring over to the v1.4 branch.
http://www.open-mpi.org/software/ompi/v1.4/
On Sep 20, 2011, at 1:16 PM, Blosch, Edwin L wrote:
> I'm having trouble building 1.4.3 using PGI 10.9. I searched the list
> archives briefly but I didn't stumble across anything that looked like the
> same problem, so I thought I'd ask if an expert might recognize the nature of
> the problem here.
>
> The configure command:
>
> ./configure --prefix=/release/openmpi-pgi --without-tm --without-sge
> --enable-mpirun-prefix-by-default --enable-contrib-no-build=vt
> --enable-mca-no-build=maffinity --disable-per-user-config-files
> --disable-io-romio --with-mpi-f90-size=small --enable-static --disable-shared
> --with-wrapper-cflags=-Msignextend --with-wrapper-cxxflags=-Msignextend
> CXX=/appserv/pgi/linux86-64/10.9/bin/pgCC
> CC=/appserv/pgi/linux86-64/10.9/bin/pgcc 'CFLAGS= -O2 -Mcache_align -Minfo
> -Msignextend -Msignextend' 'CXXFLAGS= -O2 -Mcache_align -Minfo -Msignextend
> -Msignextend' F77=/appserv/pgi/linux86-64/10.9/bin/pgf95
> 'FFLAGS=-D_GNU_SOURCE -O2 -Mcache_align -Minfo -Munixlogical'
> FC=/appserv/pgi/linux86-64/10.9/bin/pgf95 'FCFLAGS=-D_GNU_SOURCE -O2
> -Mcache_align -Minfo -Munixlogical' 'LDFLAGS= -Bstatic_pgi'
>
> The place where the build eventually dies:
>
> /bin/sh ../../../libtool --tag=CXX --mode=link
> /appserv/pgi/linux86-64/10.9/bin/pgCC -DNDEBUG -O2 -Mcache_align -Minfo
> -Msignextend -Msignextend -version-info 0:1:0 -export-dynamic -Bstatic_pgi
> -o libmpi_cxx.la -rpath /release/cfd/openmpi-pgi/lib mpicxx.lo intercepts.lo
> comm.lo datatype.lo win.lo file.lo ../../../ompi/libmpi.la -lnsl -lutil
> -lpthread
> libtool: link: tpldir=Template.dir
> libtool: link: rm -rf Template.dir
> libtool: link: /appserv/pgi/linux86-64/10.9/bin/pgCC --prelink_objects
> --instantiation_dir Template.dir mpicxx.o intercepts.o comm.o datatype.o
> win.o file.o
> pgCC-Warning-prelink_objects switch is deprecated
> pgCC-Warning-instantiation_dir switch is deprecated
> /usr/lib64/crt1.o: In function `_start':
> /usr/src/packages/BUILD/glibc-2.9/csu/../sysdeps/x86_64/elf/start.S:109:
> undefined reference to `main'
> mpicxx.o: In function `__sti___9_mpicxx_cc_a6befbec':
> (.text+0x49): undefined reference to `ompi_mpi_errors_are_fatal'
> mpicxx.o: In function `__sti___9_mpicxx_cc_a6befbec':
> (.text+0x62): undefined reference to `ompi_mpi_errors_return'
> mpicxx.o: In function `__sti___9_mpicxx_cc_a6befbec':
> (.text+0x7b): undefined reference to `ompi_mpi_errors_throw_exceptions'
> _______________________________________________
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--
Jeff Squyres
[email protected]
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