On Aug 10, 2009, at 13:01 PM, Gus Correa wrote:
Hi Jody
We don't have Mac OS-X, but Linux, not sure if this applies to you.
Did you configure your OpenMPI with Torque support,
and pointed to the same library that provides the
Torque you are using (--with-tm=/path/to/torque-library-directory)?
Not explicitly. I'll check into that....
Are you using the right mpirun? (There are so many out there.)
yeah - I use the explicit path and moved the OS X one.
Thanks! Jody
Gus Correa
---------------------------------------------------------------------
Gustavo Correa
Lamont-Doherty Earth Observatory - Columbia University
Palisades, NY, 10964-8000 - USA
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Jody Klymak wrote:
Hi All,
I've been trying to get torque pbs to work on my OS X 10.5.7
cluster with openMPI (after finding that Xgrid was pretty flaky
about connections). I *think* this is an MPI problem (perhaps via
operator error!)
If I submit openMPI with:
#PBS -l nodes=2:ppn=8
mpirun MyProg
pbs locks off two of the processors, checked via "pbsnodes -a", and
the job output. But mpirun runs the whole job on the second of the
two processors.
If I run the same job w/o qsub (i.e. using ssh)
mpirun -n 16 -host xserve01,xserve02 MyProg
it runs fine on all the nodes....
My /var/spool/toque/server_priv/nodes file looks like:
xserve01.local np=8
xserve02.local np=8
Any idea what could be going wrong or how to debu this properly?
There is nothing suspicious in the server or mom logs.
Thanks for any help,
Jody
--
Jody Klymak
http://web.uvic.ca/~jklymak/
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