Good afternoon Ted and Bridget,
Following the full instructions on including/excluding worked!
Thanks so much for your quick replies and help,
-Taylor
On Saturday, February 25, 2017 8:09 AM, "Bridget McInnes
[email protected] [umls-similarity]" <[email protected]> wrote:
Hello Taylor,
MDR is not part of the Level 1 + SNOMED CT release. You need to go into the
source list tab in the MetaMorphosys and specify that you would like to include
MDR. If you scroll down to Source List here:
https://www.nlm.nih.gov/research/umls/implementation_resources/metamorphosys/help.html
They have a pretty good explanation on how to use the include/exclude option.
Hopefully this helps.
Let us know if you run into any problems.
Best regards,
Bridget
On Fri, Feb 24, 2017 at 3:18 PM, Taylor Olson [email protected]
[umls-similarity] <[email protected]> wrote:
The 2016AA release
On Friday, February 24, 2017, 8:49 AM, Ted Pedersen [email protected]
[umls-similarity] <umls-similarity@yahoogroups. com> wrote:
I think MDR is the right way to designate Medra...which version of the UMLS
are you using?
On Thu, Feb 23, 2017 at 10:10 AM, Taylor Olson [email protected]
[umls-similarity] <umls-similarity@yahoogroups. com> wrote:
[Attachment(s) from Taylor Olson included below] Hello,
I have been running umls-similarity for a while now (with MSH) for my research
and it has worked great.
However, while changing my config file to add MedDra (MDR). It returns an error
that SAB "MDR" does not exist in your current UMLS view.*I have attached a
screen shot of this*
I have attempted repopulating the database from the release but no luck.
Do you have any suggestions as to how I could fix this? (it may be something
simple I messed up).
Thanks!
Taylor OlsonUniversity of Northern [email protected], [email protected]
319-310-2807
#yiv2455757034 #yiv2455757034 -- #yiv2455757034ygrp-mkp {border:1px solid
#d8d8d8;font-family:Arial;margin:10px 0;padding:0 10px;}#yiv2455757034
#yiv2455757034ygrp-mkp hr {border:1px solid #d8d8d8;}#yiv2455757034
#yiv2455757034ygrp-mkp #yiv2455757034hd
{color:#628c2a;font-size:85%;font-weight:700;line-height:122%;margin:10px
0;}#yiv2455757034 #yiv2455757034ygrp-mkp #yiv2455757034ads
{margin-bottom:10px;}#yiv2455757034 #yiv2455757034ygrp-mkp .yiv2455757034ad
{padding:0 0;}#yiv2455757034 #yiv2455757034ygrp-mkp .yiv2455757034ad p
{margin:0;}#yiv2455757034 #yiv2455757034ygrp-mkp .yiv2455757034ad a
{color:#0000ff;text-decoration:none;}#yiv2455757034 #yiv2455757034ygrp-sponsor
#yiv2455757034ygrp-lc {font-family:Arial;}#yiv2455757034
#yiv2455757034ygrp-sponsor #yiv2455757034ygrp-lc #yiv2455757034hd {margin:10px
0px;font-weight:700;font-size:78%;line-height:122%;}#yiv2455757034
#yiv2455757034ygrp-sponsor #yiv2455757034ygrp-lc .yiv2455757034ad
{margin-bottom:10px;padding:0 0;}#yiv2455757034 #yiv2455757034actions
{font-family:Verdana;font-size:11px;padding:10px 0;}#yiv2455757034
#yiv2455757034activity
{background-color:#e0ecee;float:left;font-family:Verdana;font-size:10px;padding:10px;}#yiv2455757034
#yiv2455757034activity span {font-weight:700;}#yiv2455757034
#yiv2455757034activity span:first-child
{text-transform:uppercase;}#yiv2455757034 #yiv2455757034activity span a
{color:#5085b6;text-decoration:none;}#yiv2455757034 #yiv2455757034activity span
span {color:#ff7900;}#yiv2455757034 #yiv2455757034activity span
.yiv2455757034underline {text-decoration:underline;}#yiv2455757034
.yiv2455757034attach
{clear:both;display:table;font-family:Arial;font-size:12px;padding:10px
0;width:400px;}#yiv2455757034 .yiv2455757034attach div a
{text-decoration:none;}#yiv2455757034 .yiv2455757034attach img
{border:none;padding-right:5px;}#yiv2455757034 .yiv2455757034attach label
{display:block;margin-bottom:5px;}#yiv2455757034 .yiv2455757034attach label a
{text-decoration:none;}#yiv2455757034 blockquote {margin:0 0 0
4px;}#yiv2455757034 .yiv2455757034bold
{font-family:Arial;font-size:13px;font-weight:700;}#yiv2455757034
.yiv2455757034bold a {text-decoration:none;}#yiv2455757034 dd.yiv2455757034last
p a {font-family:Verdana;font-weight:700;}#yiv2455757034 dd.yiv2455757034last p
span {margin-right:10px;font-family:Verdana;font-weight:700;}#yiv2455757034
dd.yiv2455757034last p span.yiv2455757034yshortcuts
{margin-right:0;}#yiv2455757034 div.yiv2455757034attach-table div div a
{text-decoration:none;}#yiv2455757034 div.yiv2455757034attach-table
{width:400px;}#yiv2455757034 div.yiv2455757034file-title a, #yiv2455757034
div.yiv2455757034file-title a:active, #yiv2455757034
div.yiv2455757034file-title a:hover, #yiv2455757034 div.yiv2455757034file-title
a:visited {text-decoration:none;}#yiv2455757034 div.yiv2455757034photo-title a,
#yiv2455757034 div.yiv2455757034photo-title a:active, #yiv2455757034
div.yiv2455757034photo-title a:hover, #yiv2455757034
div.yiv2455757034photo-title a:visited {text-decoration:none;}#yiv2455757034
div#yiv2455757034ygrp-mlmsg #yiv2455757034ygrp-msg p a
span.yiv2455757034yshortcuts
{font-family:Verdana;font-size:10px;font-weight:normal;}#yiv2455757034
.yiv2455757034green {color:#628c2a;}#yiv2455757034 .yiv2455757034MsoNormal
{margin:0 0 0 0;}#yiv2455757034 o {font-size:0;}#yiv2455757034
#yiv2455757034photos div {float:left;width:72px;}#yiv2455757034
#yiv2455757034photos div div {border:1px solid
#666666;height:62px;overflow:hidden;width:62px;}#yiv2455757034
#yiv2455757034photos div label
{color:#666666;font-size:10px;overflow:hidden;text-align:center;white-space:nowrap;width:64px;}#yiv2455757034
#yiv2455757034reco-category {font-size:77%;}#yiv2455757034
#yiv2455757034reco-desc {font-size:77%;}#yiv2455757034 .yiv2455757034replbq
{margin:4px;}#yiv2455757034 #yiv2455757034ygrp-actbar div a:first-child
{margin-right:2px;padding-right:5px;}#yiv2455757034 #yiv2455757034ygrp-mlmsg
{font-size:13px;font-family:Arial, helvetica, clean, sans-serif;}#yiv2455757034
#yiv2455757034ygrp-mlmsg table {font-size:inherit;font:100%;}#yiv2455757034
#yiv2455757034ygrp-mlmsg select, #yiv2455757034 input, #yiv2455757034 textarea
{font:99% Arial, Helvetica, clean, sans-serif;}#yiv2455757034
#yiv2455757034ygrp-mlmsg pre, #yiv2455757034 code {font:115%
monospace;}#yiv2455757034 #yiv2455757034ygrp-mlmsg *
{line-height:1.22em;}#yiv2455757034 #yiv2455757034ygrp-mlmsg #yiv2455757034logo
{padding-bottom:10px;}#yiv2455757034 #yiv2455757034ygrp-msg p a
{font-family:Verdana;}#yiv2455757034 #yiv2455757034ygrp-msg
p#yiv2455757034attach-count span {color:#1E66AE;font-weight:700;}#yiv2455757034
#yiv2455757034ygrp-reco #yiv2455757034reco-head
{color:#ff7900;font-weight:700;}#yiv2455757034 #yiv2455757034ygrp-reco
{margin-bottom:20px;padding:0px;}#yiv2455757034 #yiv2455757034ygrp-sponsor
#yiv2455757034ov li a {font-size:130%;text-decoration:none;}#yiv2455757034
#yiv2455757034ygrp-sponsor #yiv2455757034ov li
{font-size:77%;list-style-type:square;padding:6px 0;}#yiv2455757034
#yiv2455757034ygrp-sponsor #yiv2455757034ov ul {margin:0;padding:0 0 0
8px;}#yiv2455757034 #yiv2455757034ygrp-text
{font-family:Georgia;}#yiv2455757034 #yiv2455757034ygrp-text p {margin:0 0 1em
0;}#yiv2455757034 #yiv2455757034ygrp-text tt {font-size:120%;}#yiv2455757034
#yiv2455757034ygrp-vital ul li:last-child {border-right:none
!important;}#yiv2455757034