I did have the exact issue you described. My tablet initially was
working in a sort of absolute mode where lifting the stylus and lowering
it down on another area would make the cursor jump to another area on
screen, but the edges of the tablet did not match up with the edges of
my screen and did not quite corespond with the position of the stylus on
the tablet.

This went away when I was trying to set the mouse to relative mode by
adding those options in my xorg.conf.

In any case you might want to try installing the wacom-tools package and
play around with the tablet settings using xsetwacom as it may not be
automatically picking up the size of your tablet. You can use the
command 'xsetwacom list param' to see all the settings you can change.
You can also use 'xidump stylus' to see exactly the inputs that are
coming in from your stylus.

-- 
Wacom pointer not absolute by default
https://bugs.launchpad.net/bugs/117170
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