Thanks Fabio!

Here is, then, the update log, after which this thing started to happen:
Start-Date: 2011-10-27  09:51:14
Commandline: aptdaemon role='role-commit-packages' sender=':1.57'
Upgrade: gnome-keyring:i386 (3.2.0-0ubuntu1, 3.2.1-0ubuntu1), libkrb5-3:i386 
(1.9.1+dfsg-1ubuntu1, 1.9.1+dfsg-1ubuntu1.1), gnome-utils-common:i386 
(3.2.0-0ubuntu1, 3.2.1-0ubuntu1), libpam0g:i386 (1.1.3-2ubuntu1, 
1.1.3-2ubuntu2.1), apturl-common:i386 (0.5ubuntu1, 0.5.1ubuntu1), 
libpam-modules-bin:i386 (1.1.3-2ubuntu1, 1.1.3-2ubuntu2.1), tomboy:i386 
(1.8.0-1ubuntu1, 1.8.0-1ubuntu1.1), gir1.2-totem-1.0:i386 (3.0.1-0ubuntu7, 
3.0.1-0ubuntu7.1), libcanberra-gtk-module:i386 (0.28-0ubuntu10, 
0.28-0ubuntu11), libnm-glib-vpn1:i386 (0.9.1.90-0ubuntu3, 0.9.1.90-0ubuntu4), 
libkrb5support0:i386 (1.9.1+dfsg-1ubuntu1, 1.9.1+dfsg-1ubuntu1.1), 
update-manager:i386 (0.152.25, 0.152.25.4), libunity6:i386 (4.0.6-0ubuntu2, 
4.0.6-0ubuntu3), baobab:i386 (3.2.0-0ubuntu1, 3.2.1-0ubuntu1), 
gir1.2-gtk-3.0:i386 (3.2.0-0ubuntu2, 3.2.0-0ubuntu3), 
libgtksourceview-3.0-0:i386 (3.2.0-0ubuntu1, 3.2.1-0ubuntu0.1), 
libcanberra-gtk3-0:i386 (0.28-0ubuntu10, 0.28-0ubuntu11), libpam-modules:i386 
(1.1.3-2ubuntu1, 1.1.3-2ubuntu2.1), libcupscgi1:i386 (1.5.0-8ubuntu1, 
1.5.0-8ubuntu3), gir1.2-unity-4.0:i386 (4.0.6-0ubuntu2, 4.0.6-0ubuntu3), 
libgail-3-common:i386 (3.2.0-0ubuntu2, 3.2.0-0ubuntu3), network-manager:i386 
(0.9.1.90-0ubuntu3, 0.9.1.90-0ubuntu4), gnome-session-canberra:i386 
(0.28-0ubuntu10, 0.28-0ubuntu11), libgck-1-0:i386 (3.2.0-0ubuntu1, 
3.2.1-0ubuntu1), update-manager-core:i386 (0.152.25, 0.152.25.4), 
unity-place-applications:i386 (0.4.12-0ubuntu1, 0.4.12-0ubuntu2), 
gnome-mahjongg:i386 (3.2.0-0ubuntu1, 3.2.1-0ubuntu1), 
unity-lens-applications:i386 (0.4.12-0ubuntu1, 0.4.12-0ubuntu2), 
totem-plugins:i386 (3.0.1-0ubuntu7, 3.0.1-0ubuntu7.1), libpam-runtime:i386 
(1.1.3-2ubuntu1, 1.1.3-2ubuntu2.1), gnome-screenshot:i386 (3.2.0-0ubuntu1, 
3.2.1-0ubuntu1), system-config-printer-gnome:i386 (1.3.6+20110831-0ubuntu9.1, 
1.3.6+20110831-0ubuntu9.2), gedit:i386 (3.2.0-0ubuntu1, 3.2.1-0ubuntu1), 
libnm-util2:i386 (0.9.1.90-0ubuntu3, 0.9.1.90-0ubuntu4), libdecoration0:i386 
(0.9.6+bzr20110929-0ubuntu3, 0.9.6+bzr20110929-0ubuntu5), 
gnome-session-common:i386 (3.2.0-0ubuntu3, 3.2.1-0ubuntu1), 
libpam-gnome-keyring:i386 (3.2.0-0ubuntu1, 3.2.1-0ubuntu1), cups-client:i386 
(1.5.0-8ubuntu1, 1.5.0-8ubuntu3), libcupsmime1:i386 (1.5.0-8ubuntu1, 
1.5.0-8ubuntu3), xserver-common:i386 (1.10.4-1ubuntu4, 1.10.4-1ubuntu4.1), 
gnome-control-center:i386 (3.2.0-0ubuntu6, 3.2.1-0ubuntu1), libgcr-3-1:i386 
(3.2.0-0ubuntu1, 3.2.1-0ubuntu1), update-notifier-common:i386 (0.117ubuntu3, 
0.117ubuntu3.1), seahorse:i386 (3.2.0-0ubuntu1, 3.2.1-0ubuntu1), 
system-config-printer-udev:i386 (1.3.6+20110831-0ubuntu9.1, 
1.3.6+20110831-0ubuntu9.2), empathy:i386 (3.2.0-0ubuntu1, 3.2.0.1-0ubuntu1), 
totem-common:i386 (3.0.1-0ubuntu7, 3.0.1-0ubuntu7.1), vinagre:i386 
(3.2.0-0ubuntu1, 3.2.1-0ubuntu1), libtotem0:i386 (3.0.1-0ubuntu7, 
3.0.1-0ubuntu7.1), update-notifier:i386 (0.117ubuntu3, 0.117ubuntu3.1), 
initramfs-tools-bin:i386 (0.99ubuntu7, 0.99ubuntu8), gnome-font-viewer:i386 
(3.2.0-0ubuntu1, 3.2.1-0ubuntu1), gir1.2-gtksource-3.0:i386 (3.2.0-0ubuntu1, 
3.2.1-0ubuntu0.1), xserver-xorg-core:i386 (1.10.4-1ubuntu4, 1.10.4-1ubuntu4.1), 
telepathy-indicator:i386 (0.0.6-0ubuntu2, 0.0.7-0ubuntu1), sni-qt:i386 
(0.2.5-0ubuntu1, 0.2.5-0ubuntu2), nautilus-sendto-empathy:i386 (3.2.0-0ubuntu1, 
3.2.0.1-0ubuntu1), libk5crypto3:i386 (1.9.1+dfsg-1ubuntu1, 
1.9.1+dfsg-1ubuntu1.1), libcanberra-gtk3-module:i386 (0.28-0ubuntu10, 
0.28-0ubuntu11), cups-ppdc:i386 (1.5.0-8ubuntu1, 1.5.0-8ubuntu3), 
initramfs-tools:i386 (0.99ubuntu7, 0.99ubuntu8), libgrip0:i386 (0.3.2-0ubuntu3, 
0.3.2-0ubuntu3.1), gedit-common:i386 (3.2.0-0ubuntu1, 3.2.1-0ubuntu1), 
compiz-plugins-default:i386 (0.9.6+bzr20110929-0ubuntu3, 
0.9.6+bzr20110929-0ubuntu5), software-center:i386 (5.0.1.4, 5.0.2), 
compiz-plugins:i386 (0.9.6+bzr20110929-0ubuntu3, 0.9.6+bzr20110929-0ubuntu5), 
libgtk-3-common:i386 (3.2.0-0ubuntu2, 3.2.0-0ubuntu3), gnome-games-common:i386 
(3.2.0-0ubuntu1, 3.2.1-0ubuntu1), libcupsppdc1:i386 (1.5.0-8ubuntu1, 
1.5.0-8ubuntu3), cups-common:i386 (1.5.0-8ubuntu1, 1.5.0-8ubuntu3), 
compiz-plugins-main:i386 (0.9.6-0ubuntu2, 0.9.6-0ubuntu4), libcups2:i386 
(1.5.0-8ubuntu1, 1.5.0-8ubuntu3), compiz-plugins-main-default:i386 
(0.9.6-0ubuntu2, 0.9.6-0ubuntu4), libgtk-3-0:i386 (3.2.0-0ubuntu2, 
3.2.0-0ubuntu3), gnome-search-tool:i386 (3.2.0-0ubuntu1, 3.2.1-0ubuntu1), 
libnm-glib4:i386 (0.9.1.90-0ubuntu3, 0.9.1.90-0ubuntu4), gnome-session-bin:i386 
(3.2.0-0ubuntu3, 3.2.1-0ubuntu1), tzdata-java:i386 (2011k-1, 
2011l-0ubuntu0.11.10), gnome-mplayer:i386 (1.0.4-1, 1.0.4-1ubuntu0.1), 
libgail-3-0:i386 (3.2.0-0ubuntu2, 3.2.0-0ubuntu3), 
system-config-printer-common:i386 (1.3.6+20110831-0ubuntu9.1, 
1.3.6+20110831-0ubuntu9.2), gnome-online-accounts:i386 (3.2.0.1-0ubuntu2, 
3.2.1-0ubuntu1), libcanberra-gtk0:i386 (0.28-0ubuntu10, 0.28-0ubuntu11), 
cups:i386 (1.5.0-8ubuntu1, 1.5.0-8ubuntu3), libgtksourceview-3.0-common:i386 
(3.2.0-0ubuntu1, 3.2.1-0ubuntu0.1), libgoa-1.0-0:i386 (3.2.0.1-0ubuntu2, 
3.2.1-0ubuntu1), libcupsdriver1:i386 (1.5.0-8ubuntu1, 1.5.0-8ubuntu3), 
apturl:i386 (0.5ubuntu1, 0.5.1ubuntu1), gnome-sudoku:i386 (3.2.0-0ubuntu1, 
3.2.1-0ubuntu1), indicator-datetime:i386 (0.3.0-0ubuntu3, 0.3.1-0ubuntu1), 
cups-bsd:i386 (1.5.0-8ubuntu1, 1.5.0-8ubuntu3), xul-ext-ubufox:i386 
(1.0-0ubuntu1, 1.0-0ubuntu2), libcanberra0:i386 (0.28-0ubuntu10, 
0.28-0ubuntu11), gnome-icon-theme:i386 (3.2.0-0ubuntu1, 3.2.0-0ubuntu2), 
libasound2-plugins:i386 (1.0.24-0ubuntu6, 1.0.24-0ubuntu6.1), tzdata:i386 
(2011k-1, 2011l-0ubuntu0.11.10), libcupsimage2:i386 (1.5.0-8ubuntu1, 
1.5.0-8ubuntu3), indicator-sound:i386 (0.7.8-0ubuntu1, 0.7.9-0ubuntu1), 
libcanberra-pulse:i386 (0.28-0ubuntu10, 0.28-0ubuntu11), python-pyatspi2:i386 
(2.2.0-0ubuntu1, 2.2.1-0ubuntu1), gconf-editor:i386 (3.0.0-1ubuntu1, 
3.0.0-1ubuntu2), gnome-control-center-data:i386 (3.2.0-0ubuntu6, 
3.2.1-0ubuntu1), compiz:i386 (0.9.6+bzr20110929-0ubuntu3, 
0.9.6+bzr20110929-0ubuntu5), libgtk-3-bin:i386 (3.2.0-0ubuntu2, 
3.2.0-0ubuntu3), libgssapi-krb5-2:i386 (1.9.1+dfsg-1ubuntu1, 
1.9.1+dfsg-1ubuntu1.1), compiz-core:i386 (0.9.6+bzr20110929-0ubuntu3, 
0.9.6+bzr20110929-0ubuntu5), totem:i386 (3.0.1-0ubuntu7, 3.0.1-0ubuntu7.1), 
gnome-accessibility-themes:i386 (3.2.0-0ubuntu1, 3.2.1-0ubuntu1), 
libgnome-control-center1:i386 (3.2.0-0ubuntu6, 3.2.1-0ubuntu1), 
python-cupshelpers:i386 (1.3.6+20110831-0ubuntu9.1, 1.3.6+20110831-0ubuntu9.2), 
desktop-file-utils:i386 (0.18-0ubuntu8, 0.18-0ubuntu9), gnome-session:i386 
(3.2.0-0ubuntu3, 3.2.1-0ubuntu1), totem-mozilla:i386 (3.0.1-0ubuntu7, 
3.0.1-0ubuntu7.1), gnome-system-log:i386 (3.2.0-0ubuntu1, 3.2.1-0ubuntu1), 
file-roller:i386 (3.2.0-0ubuntu1, 3.2.1-0ubuntu1), compiz-gnome:i386 
(0.9.6+bzr20110929-0ubuntu3, 0.9.6+bzr20110929-0ubuntu5), empathy-common:i386 
(3.2.0-0ubuntu1, 3.2.0.1-0ubuntu1), python-gobject:i386 (3.0.0-0ubuntu2, 
3.0.0-0ubuntu3), python-gobject-cairo:i386 (3.0.0-0ubuntu2, 3.0.0-0ubuntu3), 
gnomine:i386 (3.2.0-0ubuntu1, 3.2.1-0ubuntu1)
End-Date: 2011-10-27  10:09:41
Start-Date: 2011-10-27  10:15:40
Commandline: aptdaemon role='role-commit-packages' sender=':1.57'
Upgrade: nautilus:i386 (3.2.0-0ubuntu5, 3.2.1-0ubuntu1), gir1.2-atspi-2.0:i386 
(2.2.0-0ubuntu1, 2.2.1-0ubuntu1), nautilus-data:i386 (3.2.0-0ubuntu5, 
3.2.1-0ubuntu1), at-spi2-core:i386 (2.2.0-0ubuntu1, 2.2.1-0ubuntu1), 
libatspi2.0-0:i386 (2.2.0-0ubuntu1, 2.2.1-0ubuntu1), indicator-session:i386 
(0.3.6-0ubuntu2, 0.3.7-0ubuntu1), libnautilus-extension1:i386 (3.2.0-0ubuntu5, 
3.2.1-0ubuntu1)
End-Date: 2011-10-27  10:17:40
==============================================
the 2 above updates took place one right after another, so I can't tell which 
of them caused the problem.
I tried to downgrade back to the previous state, but alas, apt reported the 
previous package version not found. So I couldn't test that way either :(.
Meantime I've found among the reported bugs one that looks a bit like this one. 
I'll check that one out and test on my system and report back.

Thanks,
Kostya

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https://bugs.launchpad.net/bugs/882420

Title:
  SAMBA network not showing in Nautilus "Browse Network" option

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