I have the same error with Ubuntu 10.04 on my brand new laptop:

[   86.983162] ata1.00: failed command: READ FPDMA QUEUED
[   86.983168] ata1.00: cmd 60/20:00:e0:63:87/00:00:18:00:00/40 tag 0 ncq 16384 
in
[   86.983169]          res 41/40:00:ec:63:87/00:00:18:00:00/40 Emask 0x409 
(media error) <F>
[   86.983172] ata1.00: status: { DRDY ERR }
[   86.983175] ata1.00: error: { UNC }
[   87.002792] ata1.00: configured for UDMA/133
[   87.002805] ata1: EH complete
[   87.796141] pwrdown, 0x6(BIT6)=71
[   88.981841] ata1.00: exception Emask 0x0 SAct 0x2 SErr 0x0 action 0x0
[   88.981845] ata1.00: irq_stat 0x40000008
[   88.981849] ata1.00: failed command: READ FPDMA QUEUED
[   88.981855] ata1.00: cmd 60/20:08:e0:63:87/00:00:18:00:00/40 tag 1 ncq 16384 
in
[   88.981856]          res 41/40:00:ec:63:87/00:00:18:00:00/40 Emask 0x409 
(media error) <F>
[   88.981859] ata1.00: status: { DRDY ERR }
[   88.981862] ata1.00: error: { UNC }
[   89.001502] ata1.00: configured for UDMA/133
[   89.001514] ata1: EH complete
[   89.796094] pwrdown, 0x6(BIT6)=71
[   90.947153] ata1.00: exception Emask 0x0 SAct 0x3 SErr 0x0 action 0x0
[   90.947158] ata1.00: irq_stat 0x40000008
[   90.947162] ata1.00: failed command: READ FPDMA QUEUED
[   90.947168] ata1.00: cmd 60/20:00:e0:63:87/00:00:18:00:00/40 tag 0 ncq 16384 
in
[   90.947169]          res 41/40:00:ec:63:87/00:00:18:00:00/40 Emask 0x409 
(media error) <F>


Over the past few days to get Ubuntu to boot, from Grub I have to choose the 
older version of the kernel (wireless doesn't work with that kernel version or 
I'd stay with it) which then runs a disk check and fix, and then reboot with 
the new kernel.

I must say I've problems with various releases of Ubuntu on a couple of
new laptops (one Toshiba, one Advent) and different replacement hard
drives.

-- 
AHCI Hard Drive constantly erroring
https://bugs.launchpad.net/bugs/383632
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