Thanks for your bugreport.
What is the output of "sudo apt-get dist-upgrade" ? What does update-
manager (the gtk version) show? I suspect this is a problem with the way
packagekit presents upgrades.
** Changed in: update-notifier (Ubuntu)
Status: New => Incomplete
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update-notifier and apt-get disagree on available updates
https://bugs.launchpad.net/bugs/388533
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