About the Project

Faculty of Health and Life Sciences

Department of Biological and Medical Sciences

3 Year, full-time PhD studentship

Eligibility: Home UK/EU and International applicants

Bursary per annum: Bursary equivalent to UKRI national minimum stipend plus
fees (current 2022/23 bursary rate is £17,668)

University fees and bench fees: University fees and bench fees will be met
by the University for the 3 years of the funded Studentship. Visa and
associated costs are not funded. International applicants can visit
<https://www.findaphd.com/common/clickCount.aspx?theid=154738&type=184&DID=1231&url=https%3a%2f%2fwww.brookes.ac.uk%2fstudents%2fisat%2f>
https://www.brookes.ac.uk/students/isat/
<https://www.findaphd.com/common/clickCount.aspx?theid=154738&type=184&DID=1231&url=https%3a%2f%2fwww.brookes.ac.uk%2fstudents%2fisat%2f>
for
further information

Closing date:  23 February 2023

Interviews: Provisionally 13,14 March 2023

Start date:  September 2023

Project Title: Investigating the Contribution of Morphological Divergence
to Behaviour using AI

Director of Studies: Daniela Santos-Nunes

Other Supervisors: Fabio Cuzzolin

Requirements:

Applicants should have a first or upper second-class honours degree from a
Higher Education Institution in the UK or acceptable equivalent
qualification. EU Applicants must have a valid IELTS Academic test
certificate (or equivalent) with an overall minimum score of 7.0 and no
score below 6.0 issued in the last 2 years by an approved test centre.

Project Description:

Identifying the genes underlying phenotypic divergence is crucial to
understanding how new phenotypes arise and species differentiate. Recently,
we identified some of the genes that contribute to divergence in size and
shape of male genitalia between two species of fruit flies (Hagen et al.,
2019, 2021). Genital structures evolve very quickly between closely related
species (Eberhard, 2010) and are known to affect mating behaviour and
reproductive fitness (Frazee and Masly, 2015, LeVasseur-Viens et al.,
2015). However, identifying behavioural differences encoded by the effect
of these genes on male genital morphology necessitates large-scale
experiments under tightly controlled conditions.  Recent advances in
automated tracking and behaviour annotation make high throughput analysis
of behaviour now possible.

This project aims to implement a high-throughput pipeline for mating
behaviour analysis, using machine-learning techniques such as deep neural
networks, to analyse video data acquired from custom-made behaviour arenas.
Objective 1: To use males that differ in the species-specific allele they
carry for each of the focal genes to determine if their effect on genital
morphology results in differences in stereotypical mating, including the
nature and timing of those differences. Objective 2: To automate the
discovery of new behavioural phenotypes and apply the pipeline in more
complex contexts (e.g. multiple mating pairs),  leading to better
understanding of group mating behaviour in the wild. Results will provide
fundamental insight into the proximate causes of behavioural evolution
driving speciation.

There is an additional requirement to undertake up to 6 hours undergraduate
teaching/week during semesters and to participate in a teaching skills
course without further remuneration.

Contact: msantos-nu...@brookes.ac.uk

How to apply: Applicants should visit the project webpage
<https://www.findaphd.com/common/clickCount.aspx?theid=154738&type=184&DID=1231&url=https%3a%2f%2fwww.brookes.ac.uk%2fcourses%2fresearch%2fcontribution-of-morphological-divergence>
for
instructions on how to submit an online application
------------------------------
Funding Notes
Eligibility: Home UK/EU and International applicants
Bursary p.a: Bursary equivalent to UKRI national minimum stipend plus fees
(current 2022/23 bursary rate is £17,668)
University fees and bench fees: University fees and bench fees will be met
by the University for the 3 years of the funded Studentship. Visa and
associated costs are not funded. International applicants can visit View
Website
<https://www.findaphd.com/common/clickCount.aspx?theid=154738&type=184&DID=1231&url=https%3a%2f%2fwww.brookes.ac.uk%2fstudents%2fisat%2f>
for
further information
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