David G. Andersen wrote:
> > body GENETICS_DATA /([ACGT]{3,}[CGT][ACGT]?\s*){3,}/
> > describe GENETICS_DATA A, C, T, G, who do we appreciate?
> > score GENETICS_DATA -5
> Ahh, heck. Here's a better one for all of the geneticists
> on the list (one of them? :-):
>
> /\b([ACGT]{1,}\s*[CGT]\s*[ACGT]{1,}\s*){3,}\b/
>
> The addition of the word boundary test also avoids all of the
> false matches from my corpus. Requires that the sequence
> be at least 9 bps, and have at least 3 non-A components.
Yes, thank you, that seems to be happy with a number of formats
(but you probably knew that anyway ;-)
All the best
Geoff
UK-Human Genome Mapping Project-Resource Centre,
Hinxton, Cambridge, CB10 1SB, UK
Tel: +44 1223 494530 Fax: +44 1223 494512 E-mail: [EMAIL PROTECTED]
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