On Wed, Nov 30, 2016 at 7:03 PM, William Hay <w....@ucl.ac.uk> wrote:
> On Wed, Nov 30, 2016 at 04:50:02PM +0530, Himanshu Joshi wrote: > > On Wed, Nov 30, 2016 at 4:04 PM, William Hay <w....@ucl.ac.uk> wrote: > > > > On Tue, Nov 29, 2016 at 10:35:35PM +0530, Himanshu Joshi wrote: > > > On Tue, Nov 29, 2016 at 8:57 PM, William Hay <w....@ucl.ac.uk> > > wrote: > > > > > > On Tue, Nov 29, 2016 at 05:43:47PM +0530, Himanshu Joshi > wrote: > > > > On Tue, Nov 29, 2016 at 5:30 PM, William Hay > > <w....@ucl.ac.uk> > > > wrote: > > > > > > > > On Tue, Nov 29, 2016 at 03:52:05PM +0530, Himanshu > Joshi > > wrote: > > > > > On Mon, Nov 28, 2016 at 9:26 PM, William Hay > > > <w....@ucl.ac.uk> > > > > wrote: > > > > > > > > > > On Mon, Nov 28, 2016 at 06:16:00PM +0530, > Himanshu > > Joshi > > > wrote: > > > > > > > > > > > > Now installation of sge is done > > > > > > > > > > > > ps aux | grep "sge" command says > > > > > > > > > > > > root 7407 0.0 0.2 213524 38396 ? > > Sl > > > 16:37 > > > > 0:01 > > > > > > /opt/sge/bin/lx-amd64/sge_qmaster > > > > > > root 9962 0.0 0.0 112648 960 > pts/0 > > S+ > > > 17:53 > > > > 0:00 > > > > > grep > > > > > > --color=auto sge > > > > > > then > > > > > > I did > > > > > > service sgeexecd.mbialjpj55 start > > > > > > Starting Grid Engine execution daemon > > > > > > > > > > > > but > > > > > > ps aux | grep "sge" again says the same > status > > > > > > > > > > > > root 7407 0.0 0.2 213524 38396 ? > > Sl > > > 16:37 > > > > 0:01 > > > > > > /opt/sge/bin/lx-amd64/sge_qmaster > > > > > > root 9974 0.0 0.0 112648 960 > pts/0 > > S+ > > > 17:54 > > > > 0:00 > > > > > grep > > > > > > --color=auto sge > > > > > > I would now setup SGE > > > > > > > > > > sge_execd should be running. > > > > > > > > > > As root try /bin/sh -x > > /etc/init.d/sgeexecd.mbilajpj55 > > > start > > > > > > > > > > > > > > > [root@mbialjpj ~]# /bin/sh -x > > > /etc/init.d/sgeexecd.mbilajpj55 start > > > > > /bin/sh: /etc/init.d/sgeexecd.mbilajpj55: No > such > > file or > > > directory > > > > > > > > Try again but with the obvious typo corrected. > > > > > > > > sorry for the typo error > > > > Here is the output... > > > I think the original typo is mine. > > > Looks like everything should work. > > > > > > can you try: > > > cat /opt/sge/default/spool/mbialjpj/messages > > > > > > It says > > > > > > > > > cat: /opt/sge/default/spool/mbialjpj/messages: No such file > or > > directory > > > > > > The log file may contain clues as to why it died/failed to > start. > > > > > > I think you are looking for /opt/sge/default/spool/ > qmaster/messages > > > please find it attached > > > Regards > > No I was hoping for the execd messages file. I think it should be > in > > the location I specified. > > Can you have a look under /opt/sge/default/spool for other > directories > > and see if they have a > > messages file somewhere under them somewhere? > > > > No I have rechecked .. and there is nothing in /opt/sge/default/spool > > folder by name "messages" . And surprisingly this folder has only one > > folder and that is "qmaster" > > And there is nothing by the name "messages" even in the main directory > > "/opt" i.e in even in opt folder the desired file is not found. > > Regards > > Himanshu > > In that case I would try running the sge_execd binary directly. > > With the sge environment loaded set the SGE_ND environment variable to > true (which will keep the daemon in the foreground) > *How to set that?* because currently /opt/sge/bin/lx-amd64/sge_execd says error: communication error for "mbialjpj/execd/1" running on port 1024: "can't bind socket" error: commlib error: can't bind socket (no additional information available) .......................... critical error: abort qmaster registration due to communication errors daemonize error: child exited before sending daemonize state > and try running /opt/sge/bin/lx-amd64/sge_execd. If it is exiting on > startup it may tell you why. > > William > -- Himanshu Joshi M.Tech. Cognitive & Neuroscience. Ph.D Scholar, Department of Psychiatry NIMHANS, Bangalore Publications <https://scholar.google.co.in/citations?hl=en&user=OspDsGUAAAAJ&view_op=list_works&gmla=AJsN-F4EvpCnES94r26jSpcDQFnN_-rSpEtp0PNdwObxCjniNpjkL55yPooOzK6epx6bHLvPuwJ2LIL3Wgkvxn4xeZXy5Wh0NpiR4E_Ebq88a1jaCS4r5q14b_4jCaeeDct8aeK15Bxr> Multimodal Brain Image Analysis Laboratory <http://mbial.weebly.com/himanshu-joshi.html>
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