uns longer time.
> Any help is appreciated.
> Jack
> July 25 2010
>
> _
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rallel cluster
> where ifort+intelmpi is installed.
> Is there something special about OpenMPI's MPI_Allreduce function call
> that I should be aware of?
>
> Thanks,
> --
> Hugo Gagnon
>
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er processes can
>> avoid participating when they don’t need to?
>>
>> Thanks in advance
>> Randolph
>>
>>
>>
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still have mpi exit?
>
> Thanks in advance.
>
> David
>
>
>
>
> ___
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./hello_c
>
>
> Some help please!
>
>
>
> --
> Osvaldo Reis Junior
> Engenharia de Computação - UEPG
> Laboratório de Genômica e Expressão - LGE
> Universidade Estadual de Campinas - UNICAMP
> MSN: osvaldorei...@hotmail.com
> Skype: osvaldoreisss
> Cel: (19) 8128-5273
>
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il. The recipient should
> check this email and any attachments for the presence of viruses. The
> company accepts no liability for any damage caused by any virus transmitted
> by this email.
>
> www.wipro.com
>
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e to treat this problem?
>
> Both Fedora7 and OpenMPI-1.1 are ancient. I'd suggest you upgrade to current
> versions before you invest time debugging this.
>
> /Peter
>
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or all your informations
> Greetings Franz Xaver
>
>
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t
>
> Supercomputing Group
>
> Via Magnanelli 6/3, Casalecchio di Reno (BO) Italy
>
> www.cineca.itTel: +39 051 6171722
>
> g.fatigati [AT] cineca.it
>
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; T. Rosmond
>
>
>
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ted_cmd: received exit
> mpirun: clean termination accomplished
>
> I know that LD_LIBRARY_PATH is -not- to blame. /home/ is exported to
> each machine from the master, and each machine uses the same image (and thus
> the same paths). If there was a problem with the path, it would not run.
>
> Any insight would be appreciated.
>
> Thank you,
> Ethan
>
>
>
> --
> Dr. Ethan Deneault
> Assistant Professor of Physics
> SC-234
> University of Tampa
> Tampa, FL 33615
> Office: (813) 257-3555
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my current installation rather than reinstall MPI
from scratch.
--
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> users mailing list
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lled on both
> machines.
>
> The only thing pertinent I could find is this faq
> http://www.open-mpi.org/faq/?category=running#missing-prereqs but I do
> not know if it applies since I have installed open mpi from the Ubuntu
> repositories and assume the libraries are correctly se
since you said you're new to MPI, what command did you use to run the 2
processes?
On Fri, Oct 22, 2010 at 9:58 PM, David Zhang wrote:
> your code works on mine machine. could be they way you build mpi.
>
> On Fri, Oct 22, 2010 at 7:26 PM, Brandon Fulcher wrote:
>
>> Hi,
ttp://www.open-mpi.org/mailman/listinfo.cgi/users
>>
>
>
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t; > > return 0 ;
> > > > > }
> > > > > if (myRank == 0)
> > > > > {
> > > > > MPI_Finalize();
> > > > > return 0;
> > > > > }
> > > > >
> > > > > }
> > > > >
> > > > > And, some output files get wrong c
gt; > > if (myRank != 0)
> > > > > {
> > > > > do some things.
> > > > > MPI_Finalize();
> > > > > return 0 ;
> > > > > }
> > > > > if (myRank == 0)
> > > > >
Ashley,
>
> --
>
> Ashley Pittman, Bath, UK.
>
> Padb - A parallel job inspection tool for cluster computing
> http://padb.pittman.org.uk
>
>
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2010
> > > ___
> > > users mailing list
> > > us...@open-mpi.org
> > > http://www.open-mpi.org/mailman/listinfo.cgi/users
> > >
> > ___
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> > http://www.open-mpi.org/mailman/listinfo.cgi/users
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gt; users mailing list
> us...@open-mpi.org
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University of California, San Diego
e relevant sections of code here would be very helpful.
> >>
> >>
> >> I would tell you to add some printf statements to your code to see what
> >> data is stored in your variables on the master before it sends them to
> >> each node, but Jeff Squyres and I agreed to disagree in a civil manner
> >> on that debugging technique earlier this week, and I'd hate to re-open
> >> those old wounds by suggesting that technique here. ;)
> >>
> >>
> >> --
> >> Prentice
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; /home/gmaj/openmpi/lib/libopen-pal.so.0
> #4 0xf7defbe7 in opal_event_loop () from
> /home/gmaj/openmpi/lib/libopen-pal.so.0
> #5 0xf7de323b in opal_progress () from
> /home/gmaj/openmpi/lib/libopen-pal.so.0
> #6 0xf7c51455 in mca_pml_ob1_send () from
> /home/gmaj/openmpi/lib
; the process that launched the runtime becoming part of the list of mpi
> processes,
>
>
>
> Regards,
>
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i.org
> >> http://www.open-mpi.org/mailman/listinfo.cgi/users
> >
> >
> > ___
> > users mailing list
> > us...@open-mpi.org
> > http://www.open-mpi.org/mailman/listinfo.cgi/users
> >
>
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Finalize();
>> }
>>
>>
>> #
>> Hi Kechagias
>>
>> If you use MPI_Scatter, the receive buffers start receiving
>> at the zero offset (i.e. at data[0]), not at data[start].
>> Also, your receive buffers could have size N1, not N.
>> I guess the MPI_Scatter call is right.
>> The
the right thing". Multiple algorithms are available and the best one is
> chosen based on run-time conditions.
>
> With any luck, you're better off with collective calls. Of course, there
> are no guarantees.
>
> ___
> users mailin
;>
>> The very very strange behaviour is that using the --debug-daemons let my
>> program run succesfully.
>>
>> Thank you in advance and sorry for my bad english
>>
>>
>>
>>
>
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or work-around to have both –H and —hostfile?
>
> Thank you.
>
> Tena Sakai
> tsa...@gallo.ucsf.edu
>
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softs HPC Server.
>
> I’ve started looking at beowulf clusters, and that lead me to PBS. Am I
> right in assuming that PBS (PBSPro or TORQUE) could be used to do the
> monitoring and the load balancing I thought of?
>
>
>
> Thanks
>
> Olivier
>
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particular thread it was suggested to use the full path of CC
>> (CC=/usr/local/intel/Compiler/11.0/083/bin/intel64/icc) on the build line
>> but I have no idea where to do this (i.e. which build line).
>> I tried to export the CC env. variable using export
>> CC=/usr/local/intel/Compiler/11.0/083/bin/intel64/icc but I got the same
>> error after running make install again.
>> I hope that anyone has a suggestion (I am a real beginner to Linux).
>>
>> best regards,
>>
>> Tom
>>
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>
>
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list
> us...@open-mpi.org
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>
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lly fixes the
> program, and I usually end up having to go back to a serial solution, which
> is really slow.
>
> If anyone might be able to help me, I would be really really grateful!!
>
> Thank you.
>
> Tom
>
>
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usual suspects such as
> ensuring you have a totally homogeneous environment (same OS, same version
> of OMPI, etc).
>
> Sent from my PDA. No type good.
>
> On Feb 1, 2011, at 4:03 AM, "David Zhang" wrote:
>
> According to the mpi_finalize documentation, a call to
l information go to:
>> http://www.cisco.com/web/about/doing_business/legal/cri/
>>
>>
>> ___
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>> us...@open-mpi.org
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>>
>
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University of California, San Diego
ed that the job aborted, but has no info as to the process
> that caused that situation.
>
> --
>
> mpirun: clean termination accomplished
>
> [tsakai@domU-12-31-39-00-D1-F2 ~]$
>
> Mpirun (or somebody else?) asks me password, which I don’t have.
> I end up typing control-C.
>
> Here’s my question:
> How can I get past authentication by mpirun where there is no password?
>
> I would appreciate your help/insight greatly.
>
> Thank you.
>
> Tena Sakai
> tsa...@gallo.ucsf.edu
>
>
>
>
>
>
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intf("received two messages\n");
> > >>
> > >> printf("myrank=%d, buf1=%d, buf2=%d\n",myrank, buf1,
> > buf2);
> > >> }
> > >>
> > >> if(myrank==1)
> > >> {
> > >> int
ledge of Fortran programming, but based on this, I
> >>> don't see how MPI_STATUS_SIZE could be getting overwritten.
> >>>
> >>>
> >> Earlier, you showed a preceding PARAMETER declaration setting a new
> value for that name, which would be required to make use of it in this
> context. Apparently, you intend to support only compilers which violate the
> Fortran standard by supporting a separate name space for PARAMETER
> identifiers, so that you can violate the MPI standard by using MPI_
> identifiers in a manner which I believe is called shadowing in C.
> >>
> >> --
> >> Tim Prince
> >> ___
> >> users mailing list
> >> us...@open-mpi.org
> >> http://www.open-mpi.org/mailman/listinfo.cgi/users
> >
> >
>
> ___
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___
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3 ./a.out".
>
> Any help will be appreciated.
> Thanks you very much.
>
> --
> eye51
>
> _______
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e same
> time.
>
> Any help is really appreciated.
>
> thanks
>
> Jack
>
> Mar 9 2011
>
>
>
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>
>
> _______
> users mailing list
> us...@open-mpi.org
> http://www.open-mpi.org/mailman/listinfo.cgi/users
>
>
>
>
> --
> David Zhang
> University of California, San Diego
>
> __
> Amos Leffler
> ___
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users mailing list
> us...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/users
> ___
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> us...@open-mpi.org
> http://www.open-mpi.org/mailman/listinfo.cgi/users
>
>
>
> ___ users mailing list
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> ___
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> us...@open-mpi.org
> http://www.open-mpi.org/mailman/listinfo.cgi/users
>
>
>
> ___ users mailing list
> us...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/users
> ___
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> us...@open-mpi.org
> http://www.open-mpi.org/mailman/listinfo.cgi/users
>
>
>
> ___ users mailing list
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> ___
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> us...@open-mpi.org
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>
>
>
> ___ users mailing list
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>
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-
> [therock.slu.loc:20365] [[INVALID],INVALID] ORTE_ERROR_LOG: Not found in
> file orted/orted_main.c at line 325
> [jian@therock ~]$
>
>
> --
> Nehemiah I. Dacres
> System Administrator
> Advanced Technology Group Saint L
_
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> take hours to finish.
>
> How can it reach "finalize" so fast ?
>
> Any help is appreciated.
>
> Jack
>
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> drivers of some sort rather then openmpi (but i'm not sure).
>
> Any thoughts, directions, or tests?
> ___
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please help me
>
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giy
> >
> >
> > ___
> > users mailing list
> > us...@open-mpi.org
> > http://www.open-mpi.org/mailman/listinfo.cgi/users
>
>
> --
> Jeff Squyres
> jsquy...@cisco.com
> For corporate legal information go to:
> http://www.cisco.com/web/about/doing_business/legal/cri/
>
>
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myid,jlen(myid),idisp(myid)
>
> CALL MPI_GATHERV(A(1,jstar),jlen(myid),MPI_REAL,
>
> *B,jlen,idisp,MPI_REAL,0,MPI_COMM_WORLD,IERR)
>
> IF(myid.EQ.0)THEN
>
> DO J=1,16
>
> DO I=1,16
>
> PRINT *,I,J,B(I,J)
>
> ENDDO
>
> ENDDO
>
> ENDIF
>
> CALL MPI_Finalize(rc)
>
> END PROGRAM
>
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; problem ?
>
> Best regards,
>
> Frédéric.
>
> PS : of course I did an extensive web search without finding anything
> usefull on my problem.
>
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time, so I'm not sure if I'm
doing something blatantly wrong.
--
David Zhang
University of California, San Diego
On Sat, Jun 5, 2010 at 2:44 PM, David Zhang wrote:
> Dear all:
>
> I'm using mpi_iprobe to serve as a way to send signals between different
> mpi executables. I'm using the following test codes (fortran):
>
> #1
> program send
> implicit none
> inc
and 1 T between each number. At least when I ran it on
the supercomputer, this is true during the very beginning; however I don't
even see this when I'm running the code on my mac mini.
On Sat, Jun 5, 2010 at 2:44 PM, David Zhang wrote:
> Dear all:
>
> I'm using mpi_ipro
is true during the very beginning; however I don't
even see this when I'm running the code on my mac mini.
On Sat, Jun 5, 2010 at 2:44 PM, David Zhang wrote:
> Dear all:
>
> I'm using mpi_iprobe to serve as a way to send signals between different
> mpi executables. I&#x
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s not
> yet 100% available to be read, but only that the message header has been
> received and that it sufficiently matches that specified matching criteria.
>
>
> David Zhang wrote:
>
> I have modified the code so that all the terminal outputs are done by one
> executable. I ha
gt; int). It may be easiest to use compilers from the same vendor / family for
> linkage purposes, but it probably isn't 100% necessary.
> >
> >
> Thanks a lot jeff.
>
> _______
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bort, the tcp layer can time out but
> mpirun just keeps on running...
>
> Any help greatly appreciated..
> Vlad
>
>
>
>
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g
> http://www.open-mpi.org/mailman/listinfo.cgi/users
>
>
>
> ------
> The New Busy think 9 to 5 is a cute idea. Combine multiple calendars with
> Hotmail. Get
> busy.<http://www.windowslive.com/campaign/thenewbusy?tile=multicalendar&ocid=PID28326::T:WLMTAGL:ON:WL:en-US:WM_HMP:042010_5>
>
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gt;
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enMPI with traditional debuggers is a pain.
> > >> >From your error message it sounds that you have some memory
> allocation problem. Do you use dynamic memory allocation (allocate and then
> free)?
> > >>
> > >> I use display (printf()) command with M
New Busy is not the too busy. Combine all your e-mail accounts with
> Hotmail. Get
> busy.<http://www.windowslive.com/campaign/thenewbusy?tile=multiaccount&ocid=PID28326::T:WLMTAGL:ON:WL:en-US:WM_HMP:042010_4>
>
> ___
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>
>
>
>
>
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> senders.
> > And then, the receiver collect messages from its buffer.
> > If the receiver's buffer is too small, there will be truncate error.
> > Any help is appreciated.
> > Jack
> > July 9 2010
> >
> >
> > Hotmail is redefining busy with tools for the New Busy. Get more from
> your
> > inbox. See how.
> > ___
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> > us...@open-mpi.org
> > http://www.open-mpi.org/mailman/listinfo.cgi/users
> >
>
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David Zhang
University of California, San Diego
Jack Bryan wrote:
>
>> Dear All:
>
>> How to find the buffer size of OpenMPI ?
>
>> I need to transfer large data between nodes on a cluster with OpenMPI
>> 1.3.4.
>
>> Many nodes need to send data to the same node .
>
>> Workers use mpi_isend, the receiver node use mpi_irecv.
>
>> because they are
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David Zhang
University of California, San Diego
side a "if (rank== ...) {} " construct?
>
> many thanks
> anton
>
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> Anton Shterenlikht
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David Zhang
University of California, San Diego
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