Re: [OMPI users] mpirun unsuccessful when run across multiple nodes

2011-04-19 Thread mohd naseem
sir when i give mpiexec hostname command. it only give one hostname. rest are not shown. On Mon, Apr 18, 2011 at 7:46 PM, Reuti wrote: > Am 18.04.2011 um 15:40 schrieb chenjie gu: > > > I am a green hand on Openmpi, I have the following Openmpi structure, > however it has problem when runni

Re: [OMPI users] mpirun unsuccessful when run across multiple nodes

2011-04-19 Thread Reuti
Good, then please supply a hostfile with the names of the machines you want to run for a particular run and give it as option to `mpiexec`. See options -np and -machinefile. -- Reuti Am 19.04.2011 um 06:38 schrieb mohd naseem: > sir > when i give mpiexec hostname command. > it only give one h

Re: [OMPI users] g95 + open-mpi

2011-04-19 Thread nicolas . cordier
all work now with this configure options to compile openmpi with g95 under x86_64: CC=gcc FC='/usr/local/bin/g95' F77='/usr/local/bin/g95' FFLAGS='-O3 -fPIC' CXX=g++ ./configure --enable-static --with-devel-headers you can close this call. :-) nicolas. > - Message d'origine - > De : n

[OMPI users] huge VmRSS on rank 0 after MPI_Init when using "btl_openib_receive_queues" option

2011-04-19 Thread Eloi Gaudry
hello, i would like to get your input on this: when launching a parallel computation on 128 nodes using openib and the "-mca btl_openib_receive_queues P,65536,256,192,128" option, i observe a rather large resident memory consumption (2GB: 65336*256*128) on the process with rank 0 (and only th

[OMPI users] mca_oob_tcp_msg_recv: readv failed:Unknown error (10054)

2011-04-19 Thread hi
On WINDOWS platform, I am observing following error when executing "mpirun blacs_hello_example.exe" (example program to test BLACS taken from http://www.netlib.org/blacs/BLACS/Examples.html#HELLO)... C:\blacs_examples> mpirun blacs_hello_example.exe calling blacs_pinfo()... forrtl: severe (157):

Re: [OMPI users] mca_oob_tcp_msg_recv: readv failed:Unknown error (10054)

2011-04-19 Thread Ralph Castain
Just a suggestion: have you looked at it in a debugger? The error isn't coming from OMPI - looks like a segfault caused by an error in the program or how it is being run. On Apr 19, 2011, at 7:19 AM, hi wrote: > On WINDOWS platform, I am observing following error when executing > "mpirun blacs

Re: [OMPI users] mca_oob_tcp_msg_recv: readv failed:Unknown error (10054)

2011-04-19 Thread hi
Hi Ralph, The Fortran code snippet is as follow... <<< ... write(*,*) "calling blacs_pinfo()..." CALL BLACS_PINFO(IAM, NPROCS) write(*,*), "after blacs_pinfo()..." write(*,*), "IAM=", IAM write(*,*), "NPROCS=", NPROCS ... >>> As you can notice, below-men

Re: [OMPI users] mca_oob_tcp_msg_recv: readv failed:Unknown error (10054)

2011-04-19 Thread Ralph Castain
On Apr 19, 2011, at 7:52 AM, hi wrote: > Hi Ralph, > > The Fortran code snippet is as follow... > > <<< > ... > write(*,*) "calling blacs_pinfo()..." > CALL BLACS_PINFO(IAM, NPROCS) > write(*,*), "after blacs_pinfo()..." > write(*,*), "IAM=", IAM > write(*,*), "NPR

Re: [OMPI users] mpirun unsuccessful when run across multiple nodes

2011-04-19 Thread mohd naseem
sorry sir, i am unable to understand what u are saying ? becoz i am a new user of mpi. please tell me details about it and command also thanks On Tue, Apr 19, 2011 at 2:32 PM, Reuti wrote: > Good, then please supply a hostfile with the names of the machines you want > to run for a particula

Re: [OMPI users] mpirun unsuccessful when run across multiple nodes

2011-04-19 Thread Ralph Castain
You have to tell mpiexec what nodes you want to use for your application. This is typically done either on the command line or in a file. For now, you could just do this: mpiexec -host node1,node2,node3 -np N ./my_app where node1,node2,node3,... are the names or IP addresses of the nodes you

[OMPI users] Problem compiling OpenMPI on Ubuntu 11.04

2011-04-19 Thread Sergiy Bubin
Hi all, I am trying to compile OpenMPI 1.4.3 with Intel compilers (version 12.0 update 2) on my new computer (Ubuntu 11.04 beta2). While running ./configure script seems to be fine, make all generates an error almost at the very beginning (see the attached output_make_all.txt file). For comple

Re: [OMPI users] Problem compiling OpenMPI on Ubuntu 11.04

2011-04-19 Thread Ralph Castain
Nothing was attached, but I doubt they would help anyway. This looks like a missing header file in Ubuntu, or else one that got moved and needs a different path. Where is asm/errno.h, and how was it included in /usr/include/linux/errno.h? Best I can figure is it got put in some non-standard pla

Re: [OMPI users] Problem compiling OpenMPI on Ubuntu 11.04

2011-04-19 Thread Jeff Squyres
Sounds like you have a busted compiler install on this machine -- if /usr/include/linux/errno.h cannot find /usr/include/asm/errno.h, then something is wrong on that machine. On Apr 19, 2011, at 12:52 PM, Sergiy Bubin wrote: > > Hi all, > > I am trying to compile OpenMPI 1.4.3 with Intel com

[OMPI users] Need help buiding OpenMPI with Intel v12.0 compilers on Linux

2011-04-19 Thread Ormiston, Scott J.
I am trying to build OpenMPI with the Intel v12.0 compiler on Linux (Centos 5). I configured using: ./configure --prefix=/home/mecfd/common/sw/openmpi-intel/ \ CC=icc CXX=icpc F77=ifort FC=ifort but when it was compiling it died with the following errors at the end: ... Making all in tools/

[OMPI users] [SPAM:### 84%]

2011-04-19 Thread christophe petit
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Re: [OMPI users] Need help buiding OpenMPI with Intel v12.0 compilers on Linux

2011-04-19 Thread Gus Correa
Hi Scott Is it possible that the Intel compiler environment is not set? Just in case, did you source the right Intel scripts to setup the icc, icpc, and ifort environment? Something like this (for a 64-bit machine): source /opt/intel/composerxe-2011.1.107/bin/compilervars.csh intel64 and perha

Re: [OMPI users] Problem compiling OpenMPI on Ubuntu 11.04

2011-04-19 Thread David Zhang
why can't you install mpi through apt-get? On Tue, Apr 19, 2011 at 10:37 AM, Jeff Squyres wrote: > Sounds like you have a busted compiler install on this machine -- if > /usr/include/linux/errno.h cannot find /usr/include/asm/errno.h, then > something is wrong on that machine. > > > On Apr 19, 2

Re: [OMPI users] Problem compiling OpenMPI on Ubuntu 11.04

2011-04-19 Thread Sergiy Bubin
Thanks for the suggestion. I have figured (by googling around and comparing the content of asm directories) that Ubuntu 11.04 has some difference in the location of /usr/include/asm/. It appears that now that whole directory is located at /usr/include/x86_64-linux-gnu/asm/. I tried to use -I b

Re: [OMPI users] Problem compiling OpenMPI on Ubuntu 11.04

2011-04-19 Thread Ralph Castain
On Apr 19, 2011, at 2:24 PM, Sergiy Bubin wrote: > > Thanks for the suggestion. I have figured (by googling around and comparing > the content of asm directories) that Ubuntu 11.04 has some difference in the > location of /usr/include/asm/. It appears that now that whole directory is > locate

Re: [OMPI users] Problem compiling OpenMPI on Ubuntu 11.04

2011-04-19 Thread Tim Prince
On 04/19/2011 01:24 PM, Sergiy Bubin wrote: /usr/include/c++/4.5/iomanip(64): error: expected an expression { return { __mask }; } ^ /usr/include/c++/4.5/iomanip(94): error: expected an expression { return { __mask }; } ^ /usr/include/c++/4.5/iomanip(125): e

Re: [OMPI users] Problem compiling OpenMPI on Ubuntu 11.04

2011-04-19 Thread Sergiy Bubin
Great! Everything has compiled fine. Thank you very much for your assistance! I would have not known what to do had I been on my own. Also, the -I option does work. It was my mistake, I typed CPPFLAGS=-I/usr/include/x86_64-linux-gnu/asm (note "/asm" in the end) when I did it first time, which

Re: [OMPI users] Problem compiling OpenMPI on Ubuntu 11.04

2011-04-19 Thread Sergiy Bubin
This works too. It is probably a better solution. Thank you very much! Sergiy > Date: Tue, 19 Apr 2011 14:03:49 -0700 > From: n...@aol.com > To: us...@open-mpi.org > Subject: Re: [OMPI users] Problem compiling OpenMPI on Ubuntu 11.04 > > On 04/19/2011 01:24 PM, Sergiy Bubin wrote: > > /usr/inc